Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3052g00001 ATGGAGGGGGATCAGGAAACAAGTGTGGCTGCATCTTCAGTGGCTCCCAAGAAGAAGAAGAATGGGTCCTTTCGATCCATTTTCATGCACGCCGATATGTTAGATTGGTTCCTCATGGTCCTTGGCCTTGTTGGGTCCCTCGGCGACGGTTTCACCACTCCTCTCGTCCTTCTCATCAGTAGCCGCTTGATGAACAATATAGGCTCTGGTCCTACCATCGATCCGAATGCTTTTACAAATTCCATTAATAAGAATGCGGTGGCCCTGCTATATTTGGCTGCTGGCTCATTCCTCACTTGCTTCCTCGAGGGGTATTGCTGGACCAGAACAGGGGAAAGGCAAGCTGCCAGAATGAGAGCTAGGTATTTGAAAGCGGTGCTCAGACAGGATGTTGCTTACTTTGATCTGCACGTGACGAGCACGTCGGAGGTGATCACCAGCGTCTCCAACGACAGCCTTGTAATTCAAGATGCTATTGCTGAGAAGGTGCCAAACTTCTTGATGAACGTGTTTATGTTCATCGGGAGCTACGTAGCGGCTTTCGCGATGTTATGGAGGCTGGCTATTGTGGGGTTCCCATTCGTGGTGCTGCTCGTGATCCCTGGTTTACTCTACGGAAGGACTCTAATGGGGTTGGCGAGGAAGATCAGAGAGGAGTATAATCACGCCGGTACAGTAGCCGAGCAGGCGATATCTTCCATAAGAACTGTGTATTCCTTCGTGGGAGAAAGCAAGACCATAGCTGCTTTCTCTGAAGCTTTACAAGGATCTGTTAAATTGGGGCTCAAGCAGGGCTTAGCTAAGGGCTTAGCCATCGGAAGCAACGGCATCGTCTTCGCCATCTGGTCCTTCATGTCTTTTTACGGCAGCACCCTCGTCATGTACCACGGCGCTCAAGGCGGTACCGTTTTCGCTGTCGGAGCTGCCATTGCCGTTGGTGGCCTATCTTTAGGGGCGGCTTTATCGAACATGAAGTACTTCTCTGACGCGAGTACGGCAGGGGAACGCATAATGGAGGTGATCAAAAGAGTGCCGAAGATTGATTCGGACAACATGAGTGGGGAGATCCTGGAGAGCGTTTCAGGGGAAGTGGAATTCGATCACGTACAATTCGCGTACCCATCCAGAAGAGGAAGCATAATCCTGAACGATTTCTGCCTGAAGGTTCCAGCTGGGAAGACGATGGCCTTAGTGGGTGGGAGTGGATCAGGAAAATCAACAGTGATATCACTTTTGCAGAGATTTTATGACCCACTTGTGGGAGAGATAAGGCTGGATGGTGTGCCCATTCACAAGATGCAGCTCAAGTGGCTGAGGTCACAGATGGGTCTGGTCAGCCAAGAGCCTGCTCTGTTCGCCACCAGCATCAAGGAGAACGTTCTCTTTGGAAAGGAAGATGCTTCCATGGAAGAGGTCATTGAAGCTGGCAAAGCTTCTAATGCGCATAATTTCATTTCCCACCTGCCTCAGGGGTACGATACTCAGACTGTTGCTATATAA 1500 0.5027 MEGDQETSVAASSVAPKKKKNGSFRSIFMHADMLDWFLMVLGLVGSLGDGFTTPLVLLISSRLMNNIGSGPTIDPNAFTNSINKNAVALLYLAAGSFLTCFLEGYCWTRTGERQAARMRARYLKAVLRQDVAYFDLHVTSTSEVITSVSNDSLVIQDAIAEKVPNFLMNVFMFIGSYVAAFAMLWRLAIVGFPFVVLLVIPGLLYGRTLMGLARKIREEYNHAGTVAEQAISSIRTVYSFVGESKTIAAFSEALQGSVKLGLKQGLAKGLAIGSNGIVFAIWSFMSFYGSTLVMYHGAQGGTVFAVGAAIAVGGLSLGAALSNMKYFSDASTAGERIMEVIKRVPKIDSDNMSGEILESVSGEVEFDHVQFAYPSRRGSIILNDFCLKVPAGKTMALVGGSGSGKSTVISLLQRFYDPLVGEIRLDGVPIHKMQLKWLRSQMGLVSQEPALFATSIKENVLFGKEDASMEEVIEAGKASNAHNFISHLPQGYDTQTVAI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3052g00001 499 Gene3D - 354 495 IPR027417 -
Pral3052g00001 499 Pfam ABC transporter transmembrane region 40 306 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3052g00001 499 FunFam ABC transporter B family member 1 26 363 - -
Pral3052g00001 499 Gene3D ABC transporter type 1, transmembrane domain 27 353 IPR036640 GO:0005524|GO:0016020
Pral3052g00001 499 PANTHER ABC TRANSPORTER B FAMILY 7 495 IPR039421 -
Pral3052g00001 499 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 40 329 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3052g00001 499 SUPERFAMILY ABC transporter transmembrane region 34 348 IPR036640 GO:0005524|GO:0016020
Pral3052g00001 499 Pfam ABC transporter 382 480 IPR003439 GO:0005524
Pral3052g00001 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 495 IPR027417 -
Pral3052g00001 499 CDD ABC_6TM_Pgp_ABCB1_D1_like 39 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3052g00001 Pral-Chr3052 270 2991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3052g00001 16 495 Calmodulin-binding Proteins AT2G36910 43.271 4.11e-125 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3052g00001 K05658 - gmx:100807709 755.362