Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3050g00005 ATGGACTTTTTATTAAAGGTAAACCATGGGCGGATGAAAGAAAGTGAAGCGCGTAGATATTTCCAGCAGCTTATAAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCACCGAGACCTAAAGCCAGAAAATTTGCTATTAGATGTTTCTGGAAATCTTAAAGTTTCTGATTTTGGTTTAAGTGCTCTCTCCCAGCAAGTCAAGGATGATGGACTGCTGCATACTACATGTGGAACGCCAAATTATGTCGCTCCTGAGGTCCTTAATGATAGAGGCTATGATGGGGCAACTGCAGATTTGTGGTCATGTGGGGTGATTCTCTTTGTATTGCTTGCAGGTTACCTGCCTTTCGATGAACCTAATCTTGTGAACCTATATAAAAAGATCTCAGCTGCTGAATTTACTTGCCCCCCTTGGCTTTCTTTCAGTGCCAGGAAACTGATCGCTCGAATCCTGGATCCAAACCCTGCAACTCGTATCACGGTATCGGAGATTCTAGTAGATGAATGGTTTAAGAAAGATTACAAGCCTCCTGTTTTTGAGGAGAAAGGAGAGGGCAACATTGATGATGTTGAAGCCGTCTTTAAAGATTCCAAAGAGCACCATGTGACCGAGAAGAAAGAAGAACAGCCAACACCTATGAATGCATTTGACTTAATCTCCATGTCCAAAGGGCTGAACCTTGAAAATTTGTTTGATATAGAGCAGGGATTTAAAAGGGAAACAAGATTCACTTCAAAATGCCCTGCCAATGAGATAATCAACAAGATCGAAGAAGCTGCAAAACCTCTTGGTTTCGATGTGCGCAAGAAAAATTACAAGATGAGGCTTGAAAACGTAAAGGCTGGAAGGAAAGGAAACCTTAATGTTGCCACAGAGGTATTTCAAGTGGCACCTTCCCTTCACATGGTTGAGGTGAGGAAAGCAAAAGGTGATACGTTGGAGTTCCATAAGTTTTACAAAAATCTATCGACAACTCTCAAGGATGTCGTCTGGAAAAGTGAAGATGATATGCAAGAACCAAAGTGA 1032 0.4176 MDFLLKVNHGRMKESEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDVSGNLKVSDFGLSALSQQVKDDGLLHTTCGTPNYVAPEVLNDRGYDGATADLWSCGVILFVLLAGYLPFDEPNLVNLYKKISAAEFTCPPWLSFSARKLIARILDPNPATRITVSEILVDEWFKKDYKPPVFEEKGEGNIDDVEAVFKDSKEHHVTEKKEEQPTPMNAFDLISMSKGLNLENLFDIEQGFKRETRFTSKCPANEIINKIEEAAKPLGFDVRKKNYKMRLENVKAGRKGNLNVATEVFQVAPSLHMVEVRKAKGDTLEFHKFYKNLSTTLKDVVWKSEDDMQEPK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3050g00005 343 ProSiteProfiles Protein kinase domain profile. 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3050g00005 343 FunFam Non-specific serine/threonine protein kinase 2 179 - -
Pral3050g00005 343 Gene3D Kinase associated domain 1, KA1 209 334 - -
Pral3050g00005 343 Pfam NAF domain 212 271 IPR004041 GO:0007165
Pral3050g00005 343 FunFam Non-specific serine/threonine protein kinase 209 334 - -
Pral3050g00005 343 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 325 - -
Pral3050g00005 343 CDD CIPK_C 216 330 - -
Pral3050g00005 343 ProSiteProfiles NAF domain profile. 210 234 IPR018451 GO:0007165
Pral3050g00005 343 SMART serkin_6 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3050g00005 343 SUPERFAMILY Protein kinase-like (PK-like) 7 186 IPR011009 -
Pral3050g00005 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 36 48 IPR008271 GO:0004672|GO:0006468
Pral3050g00005 343 Pfam Protein kinase domain 8 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3050g00005 343 Gene3D Transferase(Phosphotransferase) domain 1 2 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3050g00005 Pral-Chr3050 51079 55024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3050g00005 7 315 CBL-interacting serine-threonine protein kinases AT2G26980 77.346 0.0 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral3050g00005 Pkinase 9.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3050g00005 - - qsu:112026068 630.557