Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3050g00001 ATGGGCAACTCCTGCGTGAAGCCAGTTGCTCATGTTAATTCCTCCAATTTTTCTGGAAGTACAAAGTCTAGTAAGACACAACAGAATCACAATTCTTCAGAACAAAAAGCTGCTTTGCAAAGTTCAGTGTCAAATCCTGTCAGACCCATTTCCGATAGTCTCAATTCATTTAGCTTCAATGATCTAAAAGAAGCCACCAAGAACTTCCGTGAAGAAAATTTTATTGGAGAGGGAGGTTTTGGACGTGTCTTCAAGGGATGGATTAACAGCAACACCTTTGCTCCCACGAAACCAGGGAGTGGAATGGTAGTGGCCATTAAGCAGCTCAAGCCAGAAAGCTTTCAAGGCCACAAGGAGTGGCTTGCTGAAGTCAATTATCTAGGGCAGCTTCACCACGAAAATCTGGTGAAACTTATTGGTTATTGTTCAGAGGATAGAAATAGGCTTCTAGTTTATGAGTTCATGCAAAAAGGAAGCTTGGAGAATCATTTATTTAGAAAAGGTGTTCAACCCATATCATGGGTGACCCGGATCAATATTGCGGTTGGTGTTGCTAGAGGACTAGCATTCTTACATAGCCTGGATGCAAATGTCATCTATCGTGATTTAAAGGCTTCTAACGTCCTACTTGATTCGGATTTTAACCCAAAGCTTTCAGACTTTGGTTTGGCCAGAGATGGTCCTACTGGAGATAACACTCATGTTTCAACCAGAGTTATTGGAACTCAAGGTTACGCTGCCCCAGAGTATGTAGCCACAGGTCACTTGACTTCGAGAAGTGATGTCTACAGCTTTGGTGTTGTCTTGCTAGAGTTGCTGACCGGTAGACGAGCATTAGAAGACGACAGACCTGGGTCCATAGAAGAAACTCTGGTGGACTGGGCAAAGCCTTTCCTCAGCGATAACCGACGAGTTTTGAGGATCATGGATACAAGGCTGGGTGGCCAATACTCCAAGAAAGGAGCTCAAGCTGCAGCTGCACTTGCATTGCAATGCTTGACCTCAGATCCTAGATATAGACCTCCAATGGTGGATGTTCTTGCTGCATTGGAAGCTCTCAGTTCCTCAAGTTCAACCCCAAGGACCCCAAAATCTTACAGTGAGAATTTTTCAATCAGGCATTCTAGTCCTAGTCATCCACAAAAGGCAATCAGGCATCTAAAGTCTGTCTGA 1173 0.4408 MGNSCVKPVAHVNSSNFSGSTKSSKTQQNHNSSEQKAALQSSVSNPVRPISDSLNSFSFNDLKEATKNFREENFIGEGGFGRVFKGWINSNTFAPTKPGSGMVVAIKQLKPESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSEDRNRLLVYEFMQKGSLENHLFRKGVQPISWVTRINIAVGVARGLAFLHSLDANVIYRDLKASNVLLDSDFNPKLSDFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGHLTSRSDVYSFGVVLLELLTGRRALEDDRPGSIEETLVDWAKPFLSDNRRVLRIMDTRLGGQYSKKGAQAAAALALQCLTSDPRYRPPMVDVLAALEALSSSSSTPRTPKSYSENFSIRHSSPSHPQKAIRHLKSV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3050g00001 390 MobiDBLite consensus disorder prediction 356 378 - -
Pral3050g00001 390 SUPERFAMILY Protein kinase-like (PK-like) 51 376 IPR011009 -
Pral3050g00001 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Pral3050g00001 390 SMART serkin_6 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3050g00001 390 ProSiteProfiles Protein kinase domain profile. 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3050g00001 390 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 155 364 - -
Pral3050g00001 390 MobiDBLite consensus disorder prediction 1 46 - -
Pral3050g00001 390 CDD STKc_IRAK 75 346 - -
Pral3050g00001 390 Gene3D Phosphorylase Kinase; domain 1 25 154 - -
Pral3050g00001 390 PANTHER OS01G0588500 PROTEIN-RELATED 28 353 - -
Pral3050g00001 390 MobiDBLite consensus disorder prediction 8 46 - -
Pral3050g00001 390 MobiDBLite consensus disorder prediction 356 390 - -
Pral3050g00001 390 Gene3D Transferase(Phosphotransferase) domain 1 155 374 - -
Pral3050g00001 390 Pfam Protein tyrosine and serine/threonine kinase 73 348 IPR001245 GO:0004672|GO:0006468
Pral3050g00001 390 ProSitePatterns Protein kinases ATP-binding region signature. 75 107 IPR017441 GO:0005524
Pral3050g00001 390 FunFam Serine/threonine-protein kinase BIK1 23 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3050g00001 Pral-Chr3050 2514 7158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3050g00001 27 356 Glycoside Hydrolase AT3G07070 49.550 6.02e-104 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral3050g00001 PK_Tyr_Ser-Thr 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3050g00001 - - gmx:102664409 582.408