Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3043g00004 ATGGCGCCGAAAACTGCCAGGGTCACCAGAAATCCTGAATTGATAAGGGGGGTTGGAAAGTTTTCGAGGTCGAAAATGTACCACAAGAGAGGTCTGTGGGCCATCAAGGCTAAGCACGGCGGCGTTTTTCCTCGTCACGATCCCAAACCCAAGCCCGAAGCTCCTGCGGAGAAGCCTCCTAAATTTTACCCTGCCGACGATGTCAAGAAGCCCCTTGTCAATAAGCACAAACCGAAACCTACTAAACTTAGGGCCAGCATTACTCCCGGGACAGTATTGATACTTCTTGCTGGGAGATTCATGGGAAAGAGAGTAGTGTTTCTGAAGCAACTTCCTTCTGGATTGCTTCTTGTTACCGGTCCATTCAAGATAAATGGAGTTCCTTTGAGGCGTGTAAGCCAGTCTTATGTAATTGGGACGTCCACCAAGGTAGATATCTCTGGTGTTGACGTGGAAAAGTTTGATGACAAATACTTCACCAAGCAAGCCGAGAAGAAGAAGAAAAAAGGAGAGGGAGAGTTCTTTGAGGCAGAGAAGGAGGAGAAAAATGTGATCCCACAGGAGAAAAAAGATGACCAGAAAGTAGTGGATGCAGCATTGATAAAAGCCATAGAGAGCGTTCCAGACTTGAAGGCTTATTTGGGTGCAAGGTTTTCTCTGAAGGCAGGCATGAAGCCTCATGAGCTTGTCTTCTAA 696 0.4684 MAPKTARVTRNPELIRGVGKFSRSKMYHKRGLWAIKAKHGGVFPRHDPKPKPEAPAEKPPKFYPADDVKKPLVNKHKPKPTKLRASITPGTVLILLAGRFMGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVSQSYVIGTSTKVDISGVDVEKFDDKYFTKQAEKKKKKGEGEFFEAEKEEKNVIPQEKKDDQKVVDAALIKAIESVPDLKAYLGARFSLKAGMKPHELVF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3043g00004 231 CDD KOW_RPL6 79 231 IPR041997 -
Pral3043g00004 231 PANTHER 60S RIBOSOMAL PROTEIN L6 1 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
Pral3043g00004 231 MobiDBLite consensus disorder prediction 40 74 - -
Pral3043g00004 231 Pfam Ribosomal protein L6e 124 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
Pral3043g00004 231 Gene3D - 85 169 IPR014722 -
Pral3043g00004 231 MobiDBLite consensus disorder prediction 40 82 - -
Pral3043g00004 231 FunFam 60S ribosomal protein L6 85 169 - -
Pral3043g00004 231 Pfam Ribosomal protein L6, N-terminal domain 6 59 IPR005568 GO:0003735|GO:0005840|GO:0006412
Pral3043g00004 231 SUPERFAMILY Translation proteins SH3-like domain 85 175 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3043g00004 Pral-Chr3043 12662 14383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3043g00004 4 231 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 83.333 8.11e-122 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3043g00004 K02934 - gmx:100784101 382.874