Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral303g00002 ATGGGCTCTCACCAGGTTAAGCCATCTAGGCCCTTGGAGAGGTTCGGATTACAAAATGGGTATGTTGGAGATGGTGACTTTGTTGCTCATAGAGGATCAACGGGGCAGAAATTTGATCGTACGGAGTATGGCCGGGAAAACCTGTGCGAACCAAGGAGGCACAAGGTCGAATCTGGTACTGGCAATGGTGACAGGAAGGCTGGTGCAGAAAGAGTTAGAGATAAGACGAAATTGTATGACAAAGAGGGGAGGAAGAATGCTGTCCGTAATCATTTGAAGGTATCAAGGAAGTCTTTTGAAGATGAGATGGTTGATGGATGGCCCAAATGGCTAGTTGATAACGTTCCAAGGGAAGTATTGGCTGGCTTGACTCCCAAGAGTGCTGAATCGTACATTATGATTAATAAGGTAGGGCAGGGAACTTATAGCAATGTTTATAAAGCTCGAGATCGAAACACTGGAGAATTAGTGGCCCTCAAGAAGGTGCGCCTTGACACATCGAAGCCTGAATGCATTAAATTCATGGCAAGAGAAATTATGATATTACGGAGATTGGATCATCCCAATGTAGTAAAACTCAAAGGATTGGCCACTTCACGAATGCATTATAGTCTTTATCTTGTTTTTGACTTCATGCAATCAGATTTGGCTAGAATAGTTTCCCGTCCTGAAGAGAGATTAACTGAACCGCAGGTCAAGGCCTATATGCATCAATTGCTTTCAGGTTTGCAGCACTGTCATGACCGGGGAATTTTGCATAGAGACATTAAGGGGTCAAACCTTTTGATTGATAAAAGTGGGATGCTTAAGATTGCTGATTTTGGGCTCGCCAATTATTATAATCCCGACCATGACCAGCCTCTCACAAGCAGGGTTGTGACACTATGGTACAGAGCTCCAGAACTCTTATTAGGTGCCACAGATTATGGAGTTGGTATTGATTTATGGAGTGCTGGATGCCTCCTGGCAGAAATGTTTACTGGAGTTCCGATTATGCCTGGTAGAACAGAGGTGGAGCAACTTCATAGAATTTTTATGCTATGTGGTACACCATCAGAGGGTTATTGGAAAAAATTCAAAGTTGCTGGGACTTTTAGGCCTCCAAAGTCTTATAGACCCTGCCTTGTAGAGACTTTCAAAGATCTCCCATCATCTTCTTTGGGTCTATTATGTACTCTGCTTGCCTTGGATCCTGCTTACCGTGGAACTGCCTCTAAAGCTCTCCAAAATCGATTTTTCTATACAAGTCCTTTGGCATGTGACCTCTCTGGTCTTCCTGTGATCTGCAATGAAGATAAGGAGCAAGATCAAGCCGATGAACAAATCAAGCGCATGAATTCTAAAATTAGACGTTCGCGTACGTTACTTGAGCGTCGCAGAAAGAGCCTGGCACCTGAAAAGCCAGCAGAACCCACTATATCTTCTAAAGAGGAATTGAGAAGGAATGCCAATATATACGTCCCACATGAAGAACCGGGTAGCACAACCACAAATCCTACTGAGGCAAATGATTCTTCACCTATCTTCTCTCCAAATGTGTCCTCAGATCAAAAGCTGCTCCCCAAAAGCCATCGTGATGATAATGGAAGTGAAAACATTGATAAATTTCCTCCTTTACCTAAGTTGAGATCAAATGCAGCTAGGGAAGAAGATACTATGTACAGATTTCACCCCGTCCGCAGGTCTTCATCCACCAGGGATTTCAGAATCTCAAGACAAAGGGACCGCTTACTTCTTGAAACAGATGATCAGACTGCCATTTATGATATGTAA 1773 0.4337 MGSHQVKPSRPLERFGLQNGYVGDGDFVAHRGSTGQKFDRTEYGRENLCEPRRHKVESGTGNGDRKAGAERVRDKTKLYDKEGRKNAVRNHLKVSRKSFEDEMVDGWPKWLVDNVPREVLAGLTPKSAESYIMINKVGQGTYSNVYKARDRNTGELVALKKVRLDTSKPECIKFMAREIMILRRLDHPNVVKLKGLATSRMHYSLYLVFDFMQSDLARIVSRPEERLTEPQVKAYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKSGMLKIADFGLANYYNPDHDQPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFTGVPIMPGRTEVEQLHRIFMLCGTPSEGYWKKFKVAGTFRPPKSYRPCLVETFKDLPSSSLGLLCTLLALDPAYRGTASKALQNRFFYTSPLACDLSGLPVICNEDKEQDQADEQIKRMNSKIRRSRTLLERRRKSLAPEKPAEPTISSKEELRRNANIYVPHEEPGSTTTNPTEANDSSPIFSPNVSSDQKLLPKSHRDDNGSENIDKFPPLPKLRSNAAREEDTMYRFHPVRRSSSTRDFRISRQRDRLLLETDDQTAIYDM 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral303g00002 590 Gene3D Phosphorylase Kinase; domain 1 121 213 - -
Pral303g00002 590 FunFam probable serine/threonine-protein kinase At1g54610 118 213 - -
Pral303g00002 590 PANTHER CELL DIVISION PROTEIN KINASE 129 418 - -
Pral303g00002 590 SMART serkin_6 131 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral303g00002 590 MobiDBLite consensus disorder prediction 434 485 - -
Pral303g00002 590 MobiDBLite consensus disorder prediction 51 84 - -
Pral303g00002 590 MobiDBLite consensus disorder prediction 489 518 - -
Pral303g00002 590 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Pral303g00002 590 FunFam Putative serine/threonine-protein kinase 214 451 - -
Pral303g00002 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Pral303g00002 590 SUPERFAMILY Protein kinase-like (PK-like) 126 417 IPR011009 -
Pral303g00002 590 Gene3D Transferase(Phosphotransferase) domain 1 214 453 - -
Pral303g00002 590 ProSiteProfiles Protein kinase domain profile. 131 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral303g00002 590 MobiDBLite consensus disorder prediction 434 550 - -
Pral303g00002 590 Pfam Protein kinase domain 133 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral303g00002 Pral-Chr303 75570 79671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral303g00002 126 455 Core Cell Cycle Gene Families AT5G10270 43.516 4.54e-94 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral303g00002 Pkinase 8.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral303g00002 K08819 - gmx:100776854 742.651