LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3035g00009	ATGTCGCCGCGACCATTTTCTATGGTTGCAACAATATTATTTGTTGTTGCACAAATATTTGTGACTGCAATTTCAGTTTCAGAAGATGATAAGATCAGCAGTTTGCCGGGGCAGCCGCCGGTGAAGTTCCAGCAATATGCCGGTTACATTACCGTCGACGACAAGCAGCAGAGAGCTCTGTTTTACTACTTTGCAGAAGCAGAAGTAGACCCTGCTTCCAAGCCCCTGGTTCTCTGGTTGAATGGAGGGCCTGGCTGTTCATCTCTTGGAGCTGGAGCTTTCGTTGAGCATGGTCCTTTCAAACCGACCGAAAATGGTCTAGTAAAGAATGATTACAGCTGGAACAAAGAGGCAAATATGCTATACCTGGAATCACCAGCTGGAGTTGGTTTCTCTTACTCTGCCAACAAATCCTTCTATCGCTTTATCGATGATGAAATTACAGTAAAGGATAGTCTTGTTTTCCTTCAGCGTTGGTTCAATAAGTTTCCTCAGTACAAGAATAACGATTTCTTTATCACCGGAGAAAGCTATGGAGGCCATTATGTTCCTCAACTTGCCCAGCTGATTGTTCAAACTAAGACTCCGTTCAATCTCAAAGGGATCGCAATAGGGAACCCTCTGTTAGAGTTTAACACTGATTTCAACTCAAGAGGAGAATATTTTTGGTCGCATGGACTAATATCAGATCTGGCTTACGAGAGCTTGACGACGACATGTAACTACTCCCAAATCAGGAGGGAAGCTCAAAGCGGAAGTCTCACTCCAGCTTGTGCAGGAGTTGGCAAACTATTGTCAAGCGAAATTGGTAAATTCGTCGATACCTACGACGTCACTGCCGATGTCTGCTTGTCTACCATAGATCAACAATCTTTAGTGTTAAGCCAATTGCAAGAAACGCAAAAAATAGATGTTTGTGAAGAAGATAAGACACATAATTACCTGAACAGGAAAGACGTGCAGCAAGCTCTTCATGCTAAGCTCGTAGGACTCTCCACATGGTCTGTTTGTAGCGATGTTGTGAAATATGATATGCAGAATTTAGAGATACCAACAATTCCTATTCTTGGGAAACTTGTTGAGTCAGGCCTTCGAGTTCTTGTCTATAGTGGGGATCAAGATTCGGTGATTCCATTAATTGGGTCGCGAGCTCTGGTGAATGCACTGGCCAAGGAAATTAGATTCAAAACGACAATGCCCTACAGAGCCTGGTTTGAAGGCAAACAGGTTGCGGGGTGGACACAAGTGTATGGGGACATTTTGTCATACGCCACAATAAGAGGGGCGGCTCATGAAGCTCCGTTTTCACAACCAGAGAGATCACTTGTGCTATTCAAAGCATTTGTGGAAGGCAAACCACTTCCTGAATTCTCCTCTTCATGA	1383	0.4396	MSPRPFSMVATILFVVAQIFVTAISVSEDDKISSLPGQPPVKFQQYAGYITVDDKQQRALFYYFAEAEVDPASKPLVLWLNGGPGCSSLGAGAFVEHGPFKPTENGLVKNDYSWNKEANMLYLESPAGVGFSYSANKSFYRFIDDEITVKDSLVFLQRWFNKFPQYKNNDFFITGESYGGHYVPQLAQLIVQTKTPFNLKGIAIGNPLLEFNTDFNSRGEYFWSHGLISDLAYESLTTTCNYSQIRREAQSGSLTPACAGVGKLLSSEIGKFVDTYDVTADVCLSTIDQQSLVLSQLQETQKIDVCEEDKTHNYLNRKDVQQALHAKLVGLSTWSVCSDVVKYDMQNLEIPTIPILGKLVESGLRVLVYSGDQDSVIPLIGSRALVNALAKEIRFKTTMPYRAWFEGKQVAGWTQVYGDILSYATIRGAAHEAPFSQPERSLVLFKAFVEGKPLPEFSSS	460

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3035g00009	460	ProSitePatterns	Serine carboxypeptidases, serine active site.	173	180	IPR018202	GO:0004185
	Pral3035g00009	460	FunFam	Carboxypeptidase	352	451	-	-
	Pral3035g00009	460	Pfam	Serine carboxypeptidase	36	451	IPR001563	GO:0004185\|GO:0006508
	Pral3035g00009	460	SUPERFAMILY	alpha/beta-Hydrolases	33	455	IPR029058	-
	Pral3035g00009	460	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	31	438	IPR001563	GO:0004185\|GO:0006508
	Pral3035g00009	460	FunFam	Carboxypeptidase	25	455	-	-
	Pral3035g00009	460	Gene3D	-	306	341	-	-
	Pral3035g00009	460	PRINTS	Carboxypeptidase C serine protease (S10) family signature	123	133	IPR001563	GO:0004185\|GO:0006508
	Pral3035g00009	460	PRINTS	Carboxypeptidase C serine protease (S10) family signature	110	122	IPR001563	GO:0004185\|GO:0006508
	Pral3035g00009	460	PRINTS	Carboxypeptidase C serine protease (S10) family signature	159	184	IPR001563	GO:0004185\|GO:0006508
	Pral3035g00009	460	PRINTS	Carboxypeptidase C serine protease (S10) family signature	421	434	IPR001563	GO:0004185\|GO:0006508
	Pral3035g00009	460	Gene3D	alpha/beta hydrolase	26	285	IPR029058	-
	Pral3035g00009	460	Gene3D	-	352	451	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3035g00009	Pral-Chr3035	38076	41378	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3035g00009	314	454	Calmodulin-binding Proteins	AT2G22960	29.787	6.91e-19	82.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3035g00009	K16297		-	gmx:100805028	738.028