Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3027g00001 ATGATGCTGCTAAACCTGCAACAGAAACGTTTCTTCTTGTTCTGGTTGAGCTTCATAATCTGGTCATGGTGGAGTCTGGACGGCGTCGTTTCAGACCCACAGACCAACTTTGTGAAGATAGGGTGCAGCCAATATAACGTCACAGATGTGAACGTGTTCCACCAGAACCTAAACGCGACGTTTCGAGAGCTGAAAACGCAGATCAGCAACCAAAGCAAACACTTCGCGACGGCGCAGGCGGTGAAAGGAAACAACCCGGCTTATGCCCTCTTTCAGTGCAGAAACTACCTCTCCATCTCCGACTGCCTCAAGTGCTTTGACTTCGCCGCCGATCACATCCGCAATTGCTCCACCGGCGTCACCGGTGCCCGCATCATCTACGAAGGCTGCTTCCTCAGGTACGAGAGCAGTGGCTTCTTTGACCAGAACACAGACGCTGGCAACAACATCGTCTGTGGGAATAAAGTAAGAAACTCCACTGAACTTGCTTCAACAGTGGAACAAGCGCTGACAAATCTGCAAATAGCAACACCAAGAATACCTGGTTATTATGCAGCCATTAAAACGCCAGTGCCTAATAGTAATGGCTCAAGCATTTATGCCATTGCTCAGTGTCTTGAGACTCTCACTCAAAGTGGTTGCCAGGATTGCTTGAATACTGGCTTAAAAAATTTCCAGATCTGTCTTCCCAACTCAAATGCTGAGACTTATGATGCTGGCTGTTTTATGAGATACTCCACCACAGCTTTCTTTGCTGATAATCAAACCACTAACATCAAGCACTTCCTAAAACAAGGAGGTTCAAGCAAGAAGAAAGCCATTATTGGTGGAGTTGTTGGCGGTGCATCTTTCATTTTGATTCTCCTTGCATTATTTGCTTTATACAGACGATCAACATTGTCCAAAAGGATTCCTAGAGGTGACATTTTGGGAGCAACTGAGTTGAAAGGCCCTGTTAACTATAGGTATAAAGATCTAAAGTCTGCAACAAAAAATTTCAATAAAGAAAATAAACTAGGGGAAGGAGGTTTTGGTGATGTGTACAAGGGCACTCTGAAAAATGGAAAAGTAGTTGCTGTCAAGAAATTAGCTTTGGGCCAATCCAAACAGATGGAGAAAGATTTTGAGAGTGAAGTGAAGTTGATAAGTAATGTCCATCATCGGAATCTTGTTCGACTTCTGGGATGTTGCACTAAAGGCCAAGAGAGATTCCTTGTTTATGAGTACATGAAAAACAACAATGTTGGCCAATTCTTATTTGGTAAAAATAAAGGTTCCCTCAATTGGAAGCAACGTTATGGTATAATTTTGGGCACAGCAAGAGGTTTGGCCTATCTGCATGAGGAATTTCACGTTTGTATTATTCATAGAGATATAAAAACCACCAACATTCTCTTGGATGATGATTTCCAACCTAAAATTGCTGATTTTGGACTAGCAAGGCTTTTGCCTAAGGACCAATCTCATCTCAACACAAAATTTGCAGGAACAATGGGATACACAGCACCTGAATATGCAATGCATGGACAATTATCAGAGAAGGTTGATACTTACAGCTATGGTGTTGTACTTCTAGAAATCATAAGTGGAAGAAAGAGTGGTGAATTGAAGATTGATGATGCAAGCGAGCTTCTCCTTCAAAGAGCTTGGAAACTGTATGAGAGAGGGATGCACATAGAGTTTGTGGACAAAACCTTAGATCCAAATGAGTATGATGCAGAAGAAGTAAAGAAAATCATGGAGATTGGATTGCTTTGCACCCAAGCATCTCCTGGAGCTAGGCCAACAATGTCTGAAATTGTTGTTATGCTCAAAACCAAGGGCTTAATGGAGCAGAAGAAACCCACCATGCCTGTCTATGTTGATCCTAATTTCAGGGCTAGAACAAGCAATTCTACGTCTAATGGTACATCTTCTTCAAATGCTACAGTTTCCATTTCGAGTATATCAGGAAGATGA 1959 0.4232 MMLLNLQQKRFFLFWLSFIIWSWWSLDGVVSDPQTNFVKIGCSQYNVTDVNVFHQNLNATFRELKTQISNQSKHFATAQAVKGNNPAYALFQCRNYLSISDCLKCFDFAADHIRNCSTGVTGARIIYEGCFLRYESSGFFDQNTDAGNNIVCGNKVRNSTELASTVEQALTNLQIATPRIPGYYAAIKTPVPNSNGSSIYAIAQCLETLTQSGCQDCLNTGLKNFQICLPNSNAETYDAGCFMRYSTTAFFADNQTTNIKHFLKQGGSSKKKAIIGGVVGGASFILILLALFALYRRSTLSKRIPRGDILGATELKGPVNYRYKDLKSATKNFNKENKLGEGGFGDVYKGTLKNGKVVAVKKLALGQSKQMEKDFESEVKLISNVHHRNLVRLLGCCTKGQERFLVYEYMKNNNVGQFLFGKNKGSLNWKQRYGIILGTARGLAYLHEEFHVCIIHRDIKTTNILLDDDFQPKIADFGLARLLPKDQSHLNTKFAGTMGYTAPEYAMHGQLSEKVDTYSYGVVLLEIISGRKSGELKIDDASELLLQRAWKLYERGMHIEFVDKTLDPNEYDAEEVKKIMEIGLLCTQASPGARPTMSEIVVMLKTKGLMEQKKPTMPVYVDPNFRARTSNSTSNGTSSSNATVSISSISGR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3027g00001 652 MobiDBLite consensus disorder prediction 625 652 - -
Pral3027g00001 652 FunFam Cysteine-rich receptor-like protein kinase 2 34 139 - -
Pral3027g00001 652 FunFam Cysteine-rich receptor-like protein kinase 2 147 250 - -
Pral3027g00001 652 FunFam Cysteine-rich receptor-like protein kinase 2 410 612 - -
Pral3027g00001 652 Pfam Protein tyrosine and serine/threonine kinase 335 603 IPR001245 GO:0004672|GO:0006468
Pral3027g00001 652 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Pral3027g00001 652 ProSiteProfiles Gnk2-homologous domain profile. 144 250 IPR002902 -
Pral3027g00001 652 SUPERFAMILY Protein kinase-like (PK-like) 316 604 IPR011009 -
Pral3027g00001 652 ProSiteProfiles Gnk2-homologous domain profile. 35 139 IPR002902 -
Pral3027g00001 652 Gene3D Transferase(Phosphotransferase) domain 1 410 620 - -
Pral3027g00001 652 SMART serkin_6 333 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3027g00001 652 Pfam Salt stress response/antifungal 42 136 IPR002902 -
Pral3027g00001 652 Pfam Salt stress response/antifungal 158 247 IPR002902 -
Pral3027g00001 652 Gene3D Phosphorylase Kinase; domain 1 307 409 - -
Pral3027g00001 652 Gene3D - 34 139 IPR038408 -
Pral3027g00001 652 Gene3D - 146 250 IPR038408 -
Pral3027g00001 652 MobiDBLite consensus disorder prediction 621 652 - -
Pral3027g00001 652 FunFam Cysteine-rich receptor-like protein kinase 2 300 409 - -
Pral3027g00001 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Pral3027g00001 652 ProSiteProfiles Protein kinase domain profile. 333 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3027g00001 652 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 640 - -
Pral3027g00001 652 CDD STKc_IRAK 339 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3027g00001 Pral-Chr3027 12939 19072 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3027g00001 13 652 Receptor kinase-like Gene Family AT1G70520 37.252 6.00e-133 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3027g00001 PK_Tyr_Ser-Thr 1.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3027g00001 - - gmx:100813585 881.708