Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3025g00001 ATGAATTCTGAAGATGGTGGTGATAGTGACGCTCGACACCTCGAGGTAAGAATTCTGAAGATGGTGACACTCAAGATGGTGATGCTCCACACCCCGAGTCCATGCCCCGCAAGCCAGATTACCCCTGAGCCTCTCTCTAGTCTCTTCTGCTTCCTTGACTCTCTCATGGGAAAGGCTTCTCTGGTCTTCTTTGCATTTCTCACCTCCTTCGCCTTAACGCCCGATGTTCGAATCCCAGGAGTTTACCCCGGGCATCCTTGGCAGAGTGTTCATGCTAACATCCATGGAGGAACTGATGCCTCAGGTATGGGGGGAGCTTGTGGACACGGTAACGTCTACAGCCAAGGGTACGGCTCTAGCACGGCGGCCCTGAGCACCGCGACATTCAACTTTGAGCTGCGCTGCGGAGCATGCGTGGAGATAAAGTGCGCAAAAGACCCTCAACGGTGTCACTCTGGGAGCCTATCCATCTTCTTCACGGCCACTAACTTCCGCTATGCTCTTGCGAAAGACGTCAGCGGCCAGCCACCCTCAGCTGAAGCAGAGATCAAAACTGGCACTCAAACGCAGTATTGGTGGGGACGGTCATGGTCGTTTACGGTCACGGGCAGTGACGGCGAAGGACGTACGTCCACCTCTTGGACCATCGTGCACTGGCAATTCAGTCAAACTTTTACTGCCCGGATCTTCCAGGTTTGA 699 0.5422 MNSEDGGDSDARHLEVRILKMVTLKMVMLHTPSPCPASQITPEPLSSLFCFLDSLMGKASLVFFAFLTSFALTPDVRIPGVYPGHPWQSVHANIHGGTDASGMGGACGHGNVYSQGYGSSTAALSTATFNFELRCGACVEIKCAKDPQRCHSGSLSIFFTATNFRYALAKDVSGQPPSAEAEIKTGTQTQYWWGRSWSFTVTGSDGEGRTSTSWTIVHWQFSQTFTARIFQV 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3025g00001 232 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 104 164 IPR007112 -
Pral3025g00001 232 Gene3D - 80 198 IPR036908 -
Pral3025g00001 232 PANTHER EXPANSIN-A15 68 164 IPR002963 GO:0009664
Pral3025g00001 232 SUPERFAMILY Barwin-like endoglucanases 79 166 IPR036908 -
Pral3025g00001 232 Coils Coil 229 232 - -
Pral3025g00001 232 SMART dpbb_1 121 191 IPR007112 -
Pral3025g00001 232 PRINTS Expansin/Lol pI family signature 86 101 IPR007118 GO:0005576
Pral3025g00001 232 PRINTS Expansin/Lol pI family signature 125 143 IPR007118 GO:0005576
Pral3025g00001 232 PRINTS Expansin signature 116 130 IPR002963 GO:0009664
Pral3025g00001 232 PRINTS Expansin signature 157 167 IPR002963 GO:0009664
Pral3025g00001 232 PRINTS Expansin signature 143 154 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3025g00001 Pral-Chr3025 661 1588 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3025g00001 139 232 Expansin Gene Family AT2G39700 35.652 1.04e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3025g00001 - - qsu:112017318 155.221