Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3022g00004 ATGGAACCATCTCCAGCCAACTGGTTATCTGATTTGGAAATGGATGATTACGATTTGTTTCCCTTGTGCCACCTGAACTCTATCGATGACGATCTGTTTATTTCACAACATGACATAGCCAGTGTTGTGCAGGCGCAGTACTTGCAGCCATCTTTGTCTTGTGAGAGCTATTCTTCGTATAATTCATGCACTACTGCTGAAACTAGCCTCGAGGGGCCTCTTTTGCAGTTCAAATCCAATAATAGTTGGAATTATTCCGCCATATCTGATCCTTCATCTTCTTCTCAACTTCTGTCTTTTGATAACTCTAATAATAACACTTCGTCGCATACCAACAGCACCAGCCTTTCTCATGGTTTTGACCCAACCACGACATTGAAGCCAAACAAGGAGCTAGAGGTTCCGTCACATCATATACATTATTTCTCAGCTCAATCTCCTAATGGGTTTTTCCAAAATCATAACTTTGAGGCCAAATCCACCCAAAGCATCAATAATAGGCCCATCCCTCACGTCCGTGATCACATCATGGCTGAGAGAAAACGCAGAGAAAAACTCAGCCAGAGCTTCATTGCTCTTTCAGCCCTTGTCCCTGGCCTCAAAAAGATGGACAAGGCTTCGGTGCTTGGGGATGCTATCAAGTACGTGAAGGAGCTGAAGGAGCGACTGAGGTTGCTGGAAGAAGAGAACAAGAAAAGAAGAGTTGAATCAGTGGTTAAAGCGAAGAAATCGCAACTGTTCGAGGATGACGATGATGAAGAAGGACTTGCTGAAGTGGAAGCAAGAGTGTTGGAGAAGGAGGTACTGGTTCGGATCCACTGCCAGAAACACAAGGGACTTTTGGTGAAAATACTAGCAGAGATTCAGAATCTGCAACTTTATGTTGTCAATAGCAGCGTCTTGCCATTCGGGGACTCCAATCTTGACGTCACCATTATTGCTCAGATGGGCGAAGATTGCAGCTTGACGATGAGGGAACTCGTAAAGAACCTACGAGTGGCTATTTTAAGTGAGTCGCACTCGGATGATGCAGCCAGATACAATAAAAAACTGAGACTTCATTAA 1065 0.4423 MEPSPANWLSDLEMDDYDLFPLCHLNSIDDDLFISQHDIASVVQAQYLQPSLSCESYSSYNSCTTAETSLEGPLLQFKSNNSWNYSAISDPSSSSQLLSFDNSNNNTSSHTNSTSLSHGFDPTTTLKPNKELEVPSHHIHYFSAQSPNGFFQNHNFEAKSTQSINNRPIPHVRDHIMAERKRREKLSQSFIALSALVPGLKKMDKASVLGDAIKYVKELKERLRLLEEENKKRRVESVVKAKKSQLFEDDDDEEGLAEVEARVLEKEVLVRIHCQKHKGLLVKILAEIQNLQLYVVNSSVLPFGDSNLDVTIIAQMGEDCSLTMRELVKNLRVAILSESHSDDAARYNKKLRLH 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3022g00004 354 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 219 IPR011598 GO:0046983
Pral3022g00004 354 Coils Coil 209 236 - -
Pral3022g00004 354 Gene3D - 171 236 IPR036638 GO:0046983
Pral3022g00004 354 PANTHER BHLH TRANSCRIPTION FACTOR 44 337 - -
Pral3022g00004 354 Pfam Helix-loop-helix DNA-binding domain 175 219 IPR011598 GO:0046983
Pral3022g00004 354 MobiDBLite consensus disorder prediction 96 124 - -
Pral3022g00004 354 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 175 236 IPR036638 GO:0046983
Pral3022g00004 354 MobiDBLite consensus disorder prediction 96 128 - -
Pral3022g00004 354 SMART finulus 176 225 IPR011598 GO:0046983
Pral3022g00004 354 CDD bHLH_AtNAI1_like 171 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3022g00004 Pral-Chr3022 31732 33505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3022g00004 8 335 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.500 3.21e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral3022g00004 HLH 4.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3022g00004 - - pcin:129310279 363.229