Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3022g00001 ATGGAGGATACGACAATGCTTGAGCAGTTGCCGGTGGATTATTTTGACGGGCTTGATTTCCAATCGTTGGTCTCCGACAGTTATTCCTCGTACGAGAGTCCCAACTCCGAGAAAACACAGAATCCCCAGTCGATTATTGCCCCACCAGTACCAAGACCAAGCAAGCTGCAGGTGAAGACCAATAAGTCTGATAATGCTTCCAGACTGATTTCTTTTGAGCACTCCAATATGCACCAATGTTCCAACCAGAGTTCCAATGTTAAGCTCGAAACTATGAATGAAGAAAACGTATTGAATTTTTCGTCCTTGAGCTGCCAAGGATCATACTATGAAAACATAAATGATCAGAAACTGAGGAACACGGCGGGCACCGTGACGAGAAATCCACTCCAAGCCCAAGATCACGTCCTGTCCGAACGAAGACGAAGGGAAAAGCTCAACCAGAAGTTCATTGCTCTCTCCTCCATCATTCCGGGCCTCAAGAAGATGGACAAGGCTTCAGTGTTGGGAGATGCTATAGAGTGCATAAAACAACTGAAGGAACGCGAAAAGATTCTGGAAGAACAAGTCGCCATGAAAAGAAAGGAATCCGCAGTCTTAAAGAGAAGAACTACTCTCTTCGCCGACAATGATAACTCCCCGTCCGATGAAGTTTCCGGCCAGCCACTTGCAGAAATCGAAGCCAGAGTTCTGGGTAAGAATGTGTTCATCAGAATCCAATGCGAGAAACACGAAGGGTGTGAGGCTAAAATTCTGAGAGAATTAGAAAACCTTCATCTCACTGTTCAAAGCAGTAGCATCTTGCCATTCGGGGACGCCACTCTATGTATAACTATCATAGCTCAGATGGACGATGAGCACAGTATGACAGCAAAGGATTTCGTGGGAAGTCTGAGGAAGGCATTGACATTATTGGATCGTGCATAG 927 0.4563 MEDTTMLEQLPVDYFDGLDFQSLVSDSYSSYESPNSEKTQNPQSIIAPPVPRPSKLQVKTNKSDNASRLISFEHSNMHQCSNQSSNVKLETMNEENVLNFSSLSCQGSYYENINDQKLRNTAGTVTRNPLQAQDHVLSERRRREKLNQKFIALSSIIPGLKKMDKASVLGDAIECIKQLKEREKILEEQVAMKRKESAVLKRRTTLFADNDNSPSDEVSGQPLAEIEARVLGKNVFIRIQCEKHEGCEAKILRELENLHLTVQSSSILPFGDATLCITIIAQMDDEHSMTAKDFVGSLRKALTLLDRA 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3022g00001 308 Pfam Helix-loop-helix DNA-binding domain 134 180 IPR011598 GO:0046983
Pral3022g00001 308 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 135 204 IPR036638 GO:0046983
Pral3022g00001 308 Coils Coil 169 196 - -
Pral3022g00001 308 MobiDBLite consensus disorder prediction 27 63 - -
Pral3022g00001 308 PANTHER BHLH TRANSCRIPTION FACTOR 13 302 - -
Pral3022g00001 308 SMART finulus 136 185 IPR011598 GO:0046983
Pral3022g00001 308 MobiDBLite consensus disorder prediction 27 45 - -
Pral3022g00001 308 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 130 179 IPR011598 GO:0046983
Pral3022g00001 308 Gene3D - 127 191 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3022g00001 Pral-Chr3022 3827 4984 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3022g00001 29 303 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.929 5.27e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral3022g00001 HLH 8.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3022g00001 - - pcin:129311489 393.66