Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3021g00001 ATGAAGAGCCGGCATTTATGTTTATGGATAATCTTTATGACCTTTATGGGTTTTCATGCAAGCTTGCACGCGAAAACTATCGATCCTTACAAGGTCCTTGGGGTTGATAAAAATGCAAGTCAACGGGAAATTCAGAAGGCTTTCCACAAGCTCTCTCTGCAGTATCACCCGGACAAGAACAAAAGCAAGGGTGCACAGGAGAAGTTTTCTCAGATCAATAATGCGTATGAGATTTTGTCAGATGAAGAGAAAAGGAAGAATTATGACATGTACGGTGACGAGAAAGGCAATCCTGGATTTGGAGCTGGTCATCCTGGGGATCAGGGTGGATATACTTATTTCACAGGTGGTGGACCAGGACAAAGTCAGTTTAACTTCAAACCCGGACAATGGCAGGATATGGGTGGGCAGGGAGGTTCTCATTCATTCTCCTTCTCCTTTGGCGGGTCTGGTGGTCCTAGTTCTTTTGGATTTGGTTTGGATGACCTTTTTGGTAGTTTTTTTGGTGGTGGAGGACATGGTGGTGGGAATCGGTTTGGTGGTTTTGGCGGTTCAACTGGTTCTCAATCTGGACCCAAGAGTTCCGGTAAAAGTTTTGGAACCATAAATTCCCAAATCTTCAAAAAGGAAATAGTTGATCAAGGCAGGACTTGGCTTTTGTTATCGTATACACCCTCATTGAAGGGGCTCCAACACTTTGAATCCATTATAGAGGATGTCAACAGTTCACTGCAAGGAGCTATAAAGGTTGGAAGTATTGATTGTGTAAAGGAGGCCTCTTTGTGTCAGCAGCTTGGCACATATCCCCGAAGATTTCCAAGGGTTTTTGTTTATTCTTACAAGGGAAATGAAAAGGGTTCTTTGGTAGAATACAGTGGTGACTTGGTTGCTAAGAATTTAAAGGCTTTCTGTCAAGACCACCTGCCAAGGTTTTCAAAGCGAGCTGACTTGAATTCTCTTGATGAATTTTTAACTTCTGCAAAGTTGCCTGGGGTGATGCTTCTGTCTGCTAAGAAAGATACTCCCGTAATTTGGCGTGTTCTTAGTGGTCTGTATCACAAGCGCTTTACTTTCAGTGATGTCCAGGTTCATGATGTTTCCGATCCAAGAGTGAAAAAGCTTGGAGTTGATGCGCTCCCGGCCATAATAGGTTGGCTACCTAATGGAGAGAAGCAGATTCTGAAAACAGGGATTTCCGTAAAAGATATAAAATCTGCAGTTCATGATCTCAGTAATATACTTGATAGTTTTGAAAAAATAAGCAAAAAGGCAGGATCAAGACAGGCCAAAAAAGCATCCACTGATTCGGATGAGAGCCAGATACAATTCCTTTCTCGATCAAACTTTGATGTTCTTTGTGGCGAGAGAACCCCAGTCTGCATAATTGGTTCCTTTAGATCCTCTAAAGCCAGAGAAAAGCTGCAAACAATCCTATCTTTGGTCTCTCAAAAATCTTTCTCAAGGCAATCAAATCAAGCATCAGGCTCCAAGGACTCCATTTCCTATGCCCTTTTGGACGCCACAAAGCAACCTTCTTTTCTTAAAGCATTTGATAAAACCGGATTTAAGTCATCAAATATGTTCTTGATTGCCTACAAACCTAAAAGAAGGAAGTTCACTTCATTTCTGGGTGAAATGACGATAGAGGAAGTTGAGAATTTCGTCAGCTCAGTTCTAAACGGAGATATACCGTTCAGGGAAACAAGAGAGAAGCCTGTACTCATGTAG 1728 0.4213 MKSRHLCLWIIFMTFMGFHASLHAKTIDPYKVLGVDKNASQREIQKAFHKLSLQYHPDKNKSKGAQEKFSQINNAYEILSDEEKRKNYDMYGDEKGNPGFGAGHPGDQGGYTYFTGGGPGQSQFNFKPGQWQDMGGQGGSHSFSFSFGGSGGPSSFGFGLDDLFGSFFGGGGHGGGNRFGGFGGSTGSQSGPKSSGKSFGTINSQIFKKEIVDQGRTWLLLSYTPSLKGLQHFESIIEDVNSSLQGAIKVGSIDCVKEASLCQQLGTYPRRFPRVFVYSYKGNEKGSLVEYSGDLVAKNLKAFCQDHLPRFSKRADLNSLDEFLTSAKLPGVMLLSAKKDTPVIWRVLSGLYHKRFTFSDVQVHDVSDPRVKKLGVDALPAIIGWLPNGEKQILKTGISVKDIKSAVHDLSNILDSFEKISKKAGSRQAKKASTDSDESQIQFLSRSNFDVLCGERTPVCIIGSFRSSKAREKLQTILSLVSQKSFSRQSNQASGSKDSISYALLDATKQPSFLKAFDKTGFKSSNMFLIAYKPKRRKFTSFLGEMTIEEVENFVSSVLNGDIPFRETREKPVLM 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3021g00001 575 SUPERFAMILY Thioredoxin-like 201 308 IPR036249 -
Pral3021g00001 575 Gene3D Glutaredoxin 197 315 - -
Pral3021g00001 575 MobiDBLite consensus disorder prediction 182 199 - -
Pral3021g00001 575 MobiDBLite consensus disorder prediction 179 199 - -
Pral3021g00001 575 Pfam DnaJ domain 28 89 IPR001623 -
Pral3021g00001 575 CDD DnaJ 28 81 IPR001623 -
Pral3021g00001 575 Gene3D DnaJ domain 17 99 IPR036869 -
Pral3021g00001 575 SMART dnaj_3 27 84 IPR001623 -
Pral3021g00001 575 SUPERFAMILY Thioredoxin-like 443 564 IPR036249 -
Pral3021g00001 575 ProSitePatterns Nt-dnaJ domain signature. 69 88 IPR018253 -
Pral3021g00001 575 PRINTS DnaJ domain signature 84 103 IPR001623 -
Pral3021g00001 575 PRINTS DnaJ domain signature 64 84 IPR001623 -
Pral3021g00001 575 PRINTS DnaJ domain signature 48 63 IPR001623 -
Pral3021g00001 575 PRINTS DnaJ domain signature 30 48 IPR001623 -
Pral3021g00001 575 SUPERFAMILY Chaperone J-domain 18 96 IPR036869 -
Pral3021g00001 575 ProSiteProfiles dnaJ domain profile. 28 92 IPR001623 -
Pral3021g00001 575 PANTHER DNAJ PROTEIN ERDJ3A 1 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3021g00001 Pral-Chr3021 8794 13141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3021g00001 30 91 C2H2 Transcription Factor Family AT1G74250 41.176 1.04e-06 49.7