Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral301g00003 ATGGCGTCTCTGAAAATACAAGAGCTCTGCAGAATTGCTCCGCCACCATCTTCACCGAAGTCCTCCTTCTCTCTCACCTTCTTCGTCTTGCTTTGGCTCAGACTCCATCCCGTCGAGCGTCTCTTCTTCTTCTCTCTTCCTCACTTAAGCCATTCTTCCTTCTTCGATTCCATCGTTCCAAAGCTCAAACGCTCCCTCTCTCTCACTCTGCAACACTTCCTTCCTCTCGCTGGAAACATCGTTTGGCCCTCCGATTCACCCAAACCCATCGTTCAATACACTCCTGGATATGCCGTCTCTCTCGCCATGGCCGTTTCCGATTCTGATCTCAACCATGTCTTGAACAAATCCCCTCGTGACGCCTCACAATCTCGTGCTTTTGTTCCCAACTTGGATTCTTCTGATTCATTCGCTTCGGTTCTTTCACTGCAGATCACTCTGTTTCCCAATAGTGGATTTTGCATAGGCATGAGTTCGCACCATGCTTGTTTAGATGGTAAGTCAGCGACTATGTTCATGAAGGCCTGGGCTTATCTATGTCGAACAGAAGCAGAGAACGAATCTTCTGGTTTTCTTCCTCAAGAACTACAACCATTCACAGAAAGAGAAGTTATCATCGATCCATGTGGCATTGACATTACATACATTAATGGGTGGTCAGGTTTAGATCCCACTCATCAGGCTCAGAAGAGCCAGCCATTGAGCTTGAAGATTCTCTACGACGTGTTCCCGCTTTTAGTGGACCACTCTGCTCGAGCCATATTCGAGCTCAAACGCTGGGATATAAACAAGATAAAAGAAAGGGTTTTGCAGAAATGGGAAAATTCCGAGACCAAAGAAGAAAAAGAAGACTCAACACTTTCAAAGCCTCAAAATTTATCAACCTTCGTCCTTACAACTTCTTATGTTCTGGTTTGCCTTGCCAAGGCCGTTGAAACAACTGGCGAAAACAAGAGAAGGAAACTGTTATTCTGCTTCCCAGCTGATTGTAGGGCCAGATTAGAGCCTCCAATCCCCGAAACCTACTTTGGTAATTGTGTGATGCCTCAGATACTTGAAATACAGCCAGAAAACATAAAAGATGAGGATGGGTTAGTCATGCTTGCCAAGAAAATACACAGAAAGATAAAGAAAATACAGAAAGAGAAAGGGGCGCTTGATGGAGCAGAGACACTGTTTTCTGGGTATTCTTTGCAATCTGCAGAAGGAATCGAAGTTCAGTACATAGCAGTAGCCGGGTCGACCCGGTTCGGGGTTTACGAGACTGATTTTGGGTGGGGAAGGCCTGAGAAGATGGGGACACTTTCAGTGGACAGAGGTATAACAATGGCGATGGCAGAGAGTAAAGATGGTGATGGTGGCGTCGAAGTGGGACTCGCACTAAAGAAGCGTGTGATGGATCAGTTTGCTTCCTTGTTTGCAACAATGATTGCATCTCTTTGA 1443 0.4581 MASLKIQELCRIAPPPSSPKSSFSLTFFVLLWLRLHPVERLFFFSLPHLSHSSFFDSIVPKLKRSLSLTLQHFLPLAGNIVWPSDSPKPIVQYTPGYAVSLAMAVSDSDLNHVLNKSPRDASQSRAFVPNLDSSDSFASVLSLQITLFPNSGFCIGMSSHHACLDGKSATMFMKAWAYLCRTEAENESSGFLPQELQPFTEREVIIDPCGIDITYINGWSGLDPTHQAQKSQPLSLKILYDVFPLLVDHSARAIFELKRWDINKIKERVLQKWENSETKEEKEDSTLSKPQNLSTFVLTTSYVLVCLAKAVETTGENKRRKLLFCFPADCRARLEPPIPETYFGNCVMPQILEIQPENIKDEDGLVMLAKKIHRKIKKIQKEKGALDGAETLFSGYSLQSAEGIEVQYIAVAGSTRFGVYETDFGWGRPEKMGTLSVDRGITMAMAESKDGDGGVEVGLALKKRVMDQFASLFATMIASL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral301g00003 480 SUPERFAMILY CoA-dependent acyltransferases 287 477 - -
Pral301g00003 480 Gene3D - 1 222 IPR023213 -
Pral301g00003 480 Gene3D - 248 478 IPR023213 -
Pral301g00003 480 Pfam Transferase family 10 472 - -
Pral301g00003 480 PANTHER - 4 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral301g00003 Pral-Chr301 93773 95402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral301g00003 4 469 Monolignol Biosynthesis Gene Families AT5G48930 23.840 2.08e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral301g00003 - - pcin:129292507 625.55