Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3017g00001 ATGGAAGAAATTGGGACTTGTCTTGCGACCAAGCTTGCAGAATGTCTATGGGATCCAATTTCACGTCGTGCCCGTTATTTGTTTTGCTTGAACCAGTACATTGAGGATGTTAAGAAAATAAAAGAAGGGTTGGAGGTGACACGAGAAGATGTGAACAAGCGTAAGGAAGAAGCTCATCGAAGAACTGAAGAAATAATGCCATCTGTGGAGAAATGGTTGGATGATGTGAATGCTGTCCTAGTGGAGGTGCAAGAGCTACCGCGAGAGGTTGGAGGAGGAGGAAAGAAATGTTTTAACATGTCGCTCAAGTATTCCTTAGCAAAAGAAATGGATGATAAGGCGAAGCAGATGAAGGATCTCAAAGACAATCCCCCCTCTGAGCCATTTTCCCTGCCGAAACCACCTCCTAATCTCAGTGATCAATTTTCTTCCAAGGATGTCATGGACTTCAAATCAAGGGCGTCAATTTTTAATAGCCTTTTCAAGGCTATTGAAGATGGCAAGAATAAGATGGTGGGCCTGTATGGTATTGGGGGCTCAGGTAAAACTACCTTGGCAATCGAAGTGGGTAAGGAAGTTGAAGGGCTGAAGCTTTTTGACAAAGCGGTCATGGTGGTTGTCTCTCGGCCTCTTAATGTTAGGAACATCCAAGAAGAAATAAAAGGAAAAACCGGTTTGAAATTTGAGGAAAATACCGAATCAACCATAGCACCGAGGCTATTAACTGAATTGAAAAGTATGAACATACTTATAATCTTGGATGATGTTTGGAGCGATCTGGATCTCCAACAAATTGGTATTCCGATTAATGAAAATTGTCGTGTTTTGTTAACTACTCGTCATCGAGATGTTTGTGTCCGTATGGATTGTGAGAAAACTTTTGAATTGCCCCTCTTGATTGAGGAGGCATGGGATTTGTTAAAGATGCATGCAAACATAACCCATGACTCATTGAATGAGTTTGTTGGTGTGGGAAAAAAAATTGTTGATGAGTGCAAGGGACTACCTATTGCAATTGTGACAGTGGGAAGGGCATTAAAAGGAAAAGGAATTGTGGAGTGGAAGTCAGCACTATGGAGGCTACGACAATCCCTACCATTGGATATTGATGAGAGTTCGAGGGGCCCTTATGCATGCCTCAAATTGAGTTATGATTATTTGCCAACAAGTCTAGCAAAGCAACTCTTCCTATTGTGCTCTATGTTTCCTGAGGATCATCAAATTCATACAGAGGATCTTATTCGATTTGCCAAAGGGACTTTGAAATTTGAGGGGAATATTGTTTACACAATGGAGGATGCAAGGAGGGAGATTTCAGTAAGCATCAACAGTCTATTAGATTCTTGTTTATTAATGCATACAGATAAGCAAGCATATGTGAAAATGCATGACTTAGTTCGGGATTTAGCTTTATGGATTGTAAGGGAGCAACATCAAGCAATTTTGGTGGATAGCAATGCGGTTTCTAAAGCGTTGGCTGAAAATGGAAGTTTGAAAGAGACAAAGGTAATATCATTATGGAATCTGAAAGGCAATTTTCTGCAGTCTAATCAATTGCAATGTCCAACACTTGAGGTTCTGCTACTTCATCCTGAAGGGTTCATTGAAGATCTTAGAGGGACTGAAGCGCTCAAAATCTTGGTCCTTGTAACATCTAGCTTTCAATCGGAACGACTTGGTTGGCATAGACAAATTGGGTGGTCAATGCGGCAATCAATTGTGTCATCATTAATTAATCTTCATACCTTATGCTTCAGAGGAATTGCATTGGGTGACATCTCTTTTCTTGGTCAACTCAAAAGATTAGAGATCCTTGACTTGCGTGGTTCTCAATTTGGTGAATTACCTATTGGAATTGTAGATATGAAAAAATTGAAGCTGTTGGATGTGGTTGGATGTGAAATTGAGAAAAGTCCTTTAGAAGTTATTGGAAGATGTGAGCAACTTGAGGAATTATACTTTTGGAATAAGAAATTTGTCATCCCAGAAAATTTCTCTCTTTCAAGGTTGAAGAGGTACATTATCTATGATACCACATCATTGGGTATTCCTAGCTATGAACATGCTCCTTTTCTACAATATTTTGATGCTCATTGCATTGAAGAACTGAGAGCTTTATGCATACAAGGCTTCAAAGTCTTTGTTTCGAATTCATCAATGAAAGATCTCATTCTTGAAGCAAACTGCCTTTGGCTAGACAATTGTAGGTGGGATCTTAATGATATAAATTCTGAAATAAAGCACTTAGGAATTTCATGCTGTGAGGAGAAGAGATTCATAGCTGATAACCTTAGGACCAACATTCATCAAACAGGACAAGTGTTCTCCCACCTGATTAGTTTAAGATTGAGAGAAATGAATAGTCTTGAACAAGTGTTCCAAGATTCATCGATCACATGTTCTCTCCCAATGTTACAAGAGCTGTTTCTACAGAGCTGTCCAGAATTGGGAAGGTGCATCTTCACCCATGCCACTGTTACAAGCCTACCGAAGCTGAGGAAACTTGAGATTTGGTATTGCAGCAAATTGAAATGGCTATTCTCTTATTCTCTAGCTTCTCAGTGTCCTTCGCTAGAGGAATTGGAAATATACGGTTGTCCTAAACTTGAGAGGCTCATTGATGAAGAAGATGCGCATGGTGATTGTCTACCGCACCAAAGGGAGCCCCTTCAAGACTACCCATATGGGAATCAGACTGTGGTCACTACTGCAGAAAGCTCCCACCATTCACGCAATCAGAAACTTTGGACCCCTTTCCTAAGTTTGAAATATGTAGATATTGAGTACAGTGGAATGAAAGGTACTCTGTTTGAGGTTCAGCAAGTCAGAGGAACAGAATCTATTGAAGCAAGAGACGAACCTTTGACGTTGAATTCAGAGCTGCGTTCTTTATATTTATCATATCTCAAAGAGTTGGAATACATTTGGAAGGGCCCCACACAAAGTGTGAGTCTCGATAGACTTGAAAGTATTAGATTGGAGGATTGCTCAAAGTTGAGGAATATTTTCACTGTTGCAATTGTCACAAGCCTTCCAGAATTGAAGACATTAGAAGTAATTGGTTGTGAGGAATTGGAGGGAATATTTTGTGAAGAATCACTTGAAAATCTTTCTTCTTCTTCTAATGTTTGCTTCCCCAAACTTGAGGAAATTCTGATATTGCAAAATGCTCTGAACTGGAGAGGGTCGTTGATGAAGAAGCAGCACATGATGGGGATTGGCAGCTACCTCTTCTCAAACTGA 3243 0.4002 MEEIGTCLATKLAECLWDPISRRARYLFCLNQYIEDVKKIKEGLEVTREDVNKRKEEAHRRTEEIMPSVEKWLDDVNAVLVEVQELPREVGGGGKKCFNMSLKYSLAKEMDDKAKQMKDLKDNPPSEPFSLPKPPPNLSDQFSSKDVMDFKSRASIFNSLFKAIEDGKNKMVGLYGIGGSGKTTLAIEVGKEVEGLKLFDKAVMVVVSRPLNVRNIQEEIKGKTGLKFEENTESTIAPRLLTELKSMNILIILDDVWSDLDLQQIGIPINENCRVLLTTRHRDVCVRMDCEKTFELPLLIEEAWDLLKMHANITHDSLNEFVGVGKKIVDECKGLPIAIVTVGRALKGKGIVEWKSALWRLRQSLPLDIDESSRGPYACLKLSYDYLPTSLAKQLFLLCSMFPEDHQIHTEDLIRFAKGTLKFEGNIVYTMEDARREISVSINSLLDSCLLMHTDKQAYVKMHDLVRDLALWIVREQHQAILVDSNAVSKALAENGSLKETKVISLWNLKGNFLQSNQLQCPTLEVLLLHPEGFIEDLRGTEALKILVLVTSSFQSERLGWHRQIGWSMRQSIVSSLINLHTLCFRGIALGDISFLGQLKRLEILDLRGSQFGELPIGIVDMKKLKLLDVVGCEIEKSPLEVIGRCEQLEELYFWNKKFVIPENFSLSRLKRYIIYDTTSLGIPSYEHAPFLQYFDAHCIEELRALCIQGFKVFVSNSSMKDLILEANCLWLDNCRWDLNDINSEIKHLGISCCEEKRFIADNLRTNIHQTGQVFSHLISLRLREMNSLEQVFQDSSITCSLPMLQELFLQSCPELGRCIFTHATVTSLPKLRKLEIWYCSKLKWLFSYSLASQCPSLEELEIYGCPKLERLIDEEDAHGDCLPHQREPLQDYPYGNQTVVTTAESSHHSRNQKLWTPFLSLKYVDIEYSGMKGTLFEVQQVRGTESIEARDEPLTLNSELRSLYLSYLKELEYIWKGPTQSVSLDRLESIRLEDCSKLRNIFTVAIVTSLPELKTLEVIGCEELEGIFCEESLENLSSSSNVCFPKLEEILILQNALNWRGSLMKKQHMMGIGSYLFSN 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3017g00001 1080 Gene3D - 384 471 IPR036388 -
Pral3017g00001 1080 SUPERFAMILY L domain-like 461 870 - -
Pral3017g00001 1080 MobiDBLite consensus disorder prediction 113 141 - -
Pral3017g00001 1080 SMART AAA_5 168 302 IPR003593 GO:0016887
Pral3017g00001 1080 Gene3D - 298 383 IPR042197 -
Pral3017g00001 1080 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 915 1051 - -
Pral3017g00001 1080 Coils Coil 34 61 - -
Pral3017g00001 1080 Pfam NB-ARC domain 156 364 IPR002182 GO:0043531
Pral3017g00001 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 399 IPR027417 -
Pral3017g00001 1080 Gene3D Ribonuclease Inhibitor 477 700 IPR032675 -
Pral3017g00001 1080 FunFam Probable disease resistance protein At1g61300 139 293 - -
Pral3017g00001 1080 Gene3D - 141 294 IPR027417 -
Pral3017g00001 1080 Gene3D Ribonuclease Inhibitor 905 1058 IPR032675 -
Pral3017g00001 1080 Gene3D Ribonuclease Inhibitor 703 878 IPR032675 -
Pral3017g00001 1080 PRINTS Disease resistance protein signature 827 843 - -
Pral3017g00001 1080 PRINTS Disease resistance protein signature 171 186 - -
Pral3017g00001 1080 PRINTS Disease resistance protein signature 243 257 - -
Pral3017g00001 1080 PRINTS Disease resistance protein signature 332 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3017g00001 Pral-Chr3017 12679 17006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3017g00001 170 480 WRKY Transcription Factor Family AT5G45050 25.000 1.38e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3017g00001 - - pcin:129306241 1117.06