Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3012g00005 ATGGCTTCTTCTTCTTCTTCTTTCGATGATTCTCAAATCAAACACGATGTGTTCATCAGCTTCAGTGGCAAGGACACTAGACGCGGTTTTCTGAGTCATCTAATAAAGGAACTACGTCGGGAGAACATCATAGTCTATGTAGATGAGAAACTGAACAGAGGAGAAGAAATATCATCCTCGCTTCGAACAGCAATTAAAGAATCGCAAATTTCAATCGTCATTTTCTCAGAAAACTACGCCTCTTCGAGGTGGTGCTTGGATGAACTTGAAGAAATAATGGAGTGCATGAAAGTAAACAAACAAATTGTTCTACCCGTTTTCTACAACATAGATCCCTCACATGTACGGCATCAAAGAGGCGCTTATGAAAATGCATTTACTGAACATGAATTGAGGTTTCAAGGAAACGGCTTGAAGGTACAGAATTGGAGATCAGCCTTGAAGAATGCTGCTGAACTATCTGGCTATGATTCGTCCCGTTATGGTACTGACTCTGAGCTCATAGATGAAATCGTCAAAGATGTTTTGTTAAGAGTGAATGATATCTATCCTAGTGAGTCAAATCGTCTTGTTGGAATTGATCAACATGTTGATCGTATTAGATCATTTTTGGAAATGGAGTCAAAAGGAGTTCAAATCCTCGGAATTTGGGGCATGAGTGGTATTGGTAAAACAGCCATTGCACGAGTTGCATTTGAGAAATTCTCTTCCCGCTATGAAGGCTCTTACTTTTTAGACAATGTGAGAGAAGAATCACAAAAGCATGGGCTGAAATCTTTAAGAGAGAAACTTATTTCTGAGCTGCAAGAGGAAAAATCTACTTTCATCCGTAGAAAGCTTATTAGACGAAAAAAAGTTTTAGTTGTGCTTGATGATGTGGGTGCTCCAGAACAACTACGGCATCTAGTTACAGAAGGATTTCACTGGGGACCTGGTAGTAGAGTTATTGCAACAAGCCAAAACAAGCAAGCACTAATTGCTGGAGGAGTTCAAGCCAATGACATACTTGAGGTCAAGAAATTGGACTTTGAAGAATCCCTTAATCTTTTCAGCTTAAATGCCTTCAACAATAGCCATCCCGAAAGGGGATATGAAGAACTTTCAAAACAGGCAACTGCTTATGCCGATGGCCTTCCTCTAGCTCTGAAAGTTTTGGGTTTACATCTTTGTTCTTGTGATAGAGAAACATGGAAAAGTACATTGGGAAAACTTGAGATGTATCCCCATCCTCAAATTCAAGATGTGCTGAAAATGAGTTTTGAGGGATTAGATGATGTAGAAAGGGACATATTTCTTGATATCGCTTTCTTTTACAAAGGAGAAGATAAAGATCATGTCAAGAGGCAACTTGATGCCAATAACCTTTTTGCTGCTTATGGAATAAAAGGACTTCTGGATAAAGCTCTTATATCCATTTCAAACGACAATGTAATAAAAATGCATGACTTGATTCAAGAAATGGGTTGGGAAATAGTTCGGCAAGAATGCAAGGACAATCCTGGAGGACGTAGTCGGTTGAAGGACTTTGAGGAAGTGTATGATGTGTTAAAAAATAATAGGGGAACTGATGCCATTAAAGGCATAGTGTTATATGCTTCTCTCTTTAAAGATGTACGGTTGAATGTTGACACCTTCAAAAATATGACTAATCTCAGAATCGTCAAGTTTTACTCTTCCTGGCATGTGAGATGCTGTAATGTGCACCCTCCAACAAGTTTTTTGTCGTTCTCTGATGAGCTAAGGCGCCTACAGTGGGATGGATACCCACACCCATATCCTGAGAAACTTGTTGGGCATTCTATGCCCAACAACCATGTTGGGAAACTTTGGAAACTAGTGCAGGATTATGCGAATTCTAAGAGAATGAGCCTTGACAGCTCAAAACAATCAATGGAGTTGCTTGATTTCACAAAGGCACAGAAAACTGAATGGGAGGATATGTGTTCTTGTCAAGGTTTTTGTAACGTCAATTCACATATCTTGTCTCTTTCTATGATTGCTGCTGTGAATTTAGTTCGCTCCATAGATTCAAAGAAACATCACAGTGAGAGTAATTTCAGATCTCCTATAAACTTTGATGTCGGTTTATGCGTTAGTGTCAGGGTATTTTCGTCGTCATCAAAGGAAATATCAGAGCTGGATTTTGTAACTTCAAAATTCGAAATACTCTGCTCGTCATCAGTTGGGGGTCTCAATAAGCTAAGAAGGATCACACATGGTGATTCAAGACTAGAGATTGTTCCCCTAAATGAGTTATGTTGCCTGAGATTTTTTGAAGAGCTTAATCTCTCTGATTGCAGACGAATGAATCAAAGCCCAGAGCTGCGCATGCTATTTGACGCCTTACTTTATTTACGAGAGCTGTTTATGACTGGATGCAGTGTCTTCTTTAAATCCCCTCATACTATTTGCACCTCTTCATCATTTAATTATTTGACGGATCTACGTATACAACAAAGTCAGGCACCCGCGTGGCATTTTGCCGCATTTCCCCTCAAGTCAGGGGAGCTTGTGCTCGTCACGGTAGCATATAAACGGGCGGTGGATCTTTTGGCTTTGTCTGCGCATTTCCTTTACGATCATGATTCCTCTTGTGCGATAGGGAAGGTGAACGGAAACCAATTCTTTATTAGAGGACCACATATGTCAAGGAGCCTGATTCGGTGTCCATCAGTATCATCATGGTTGAGGTAA 2694 0.4005 MASSSSSFDDSQIKHDVFISFSGKDTRRGFLSHLIKELRRENIIVYVDEKLNRGEEISSSLRTAIKESQISIVIFSENYASSRWCLDELEEIMECMKVNKQIVLPVFYNIDPSHVRHQRGAYENAFTEHELRFQGNGLKVQNWRSALKNAAELSGYDSSRYGTDSELIDEIVKDVLLRVNDIYPSESNRLVGIDQHVDRIRSFLEMESKGVQILGIWGMSGIGKTAIARVAFEKFSSRYEGSYFLDNVREESQKHGLKSLREKLISELQEEKSTFIRRKLIRRKKVLVVLDDVGAPEQLRHLVTEGFHWGPGSRVIATSQNKQALIAGGVQANDILEVKKLDFEESLNLFSLNAFNNSHPERGYEELSKQATAYADGLPLALKVLGLHLCSCDRETWKSTLGKLEMYPHPQIQDVLKMSFEGLDDVERDIFLDIAFFYKGEDKDHVKRQLDANNLFAAYGIKGLLDKALISISNDNVIKMHDLIQEMGWEIVRQECKDNPGGRSRLKDFEEVYDVLKNNRGTDAIKGIVLYASLFKDVRLNVDTFKNMTNLRIVKFYSSWHVRCCNVHPPTSFLSFSDELRRLQWDGYPHPYPEKLVGHSMPNNHVGKLWKLVQDYANSKRMSLDSSKQSMELLDFTKAQKTEWEDMCSCQGFCNVNSHILSLSMIAAVNLVRSIDSKKHHSESNFRSPINFDVGLCVSVRVFSSSSKEISELDFVTSKFEILCSSSVGGLNKLRRITHGDSRLEIVPLNELCCLRFFEELNLSDCRRMNQSPELRMLFDALLYLRELFMTGCSVFFKSPHTICTSSSFNYLTDLRIQQSQAPAWHFAAFPLKSGELVLVTVAYKRAVDLLALSAHFLYDHDSSCAIGKVNGNQFFIRGPHMSRSLIRCPSVSSWLR 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3012g00005 897 Gene3D - 180 331 IPR027417 -
Pral3012g00005 897 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 181 - -
Pral3012g00005 897 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Pral3012g00005 897 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 793 IPR044974 GO:0006952
Pral3012g00005 897 SUPERFAMILY L domain-like 479 814 - -
Pral3012g00005 897 Gene3D Ribonuclease Inhibitor 529 837 IPR032675 -
Pral3012g00005 897 SMART till_3 14 153 IPR000157 GO:0007165
Pral3012g00005 897 Gene3D - 12 179 IPR035897 -
Pral3012g00005 897 PRINTS Disease resistance protein signature 213 228 - -
Pral3012g00005 897 PRINTS Disease resistance protein signature 753 769 - -
Pral3012g00005 897 PRINTS Disease resistance protein signature 375 389 - -
Pral3012g00005 897 PRINTS Disease resistance protein signature 280 294 - -
Pral3012g00005 897 Gene3D - 340 424 IPR042197 -
Pral3012g00005 897 SUPERFAMILY "Winged helix" DNA-binding domain 411 516 IPR036390 -
Pral3012g00005 897 Pfam TIR domain 14 188 IPR000157 GO:0007165
Pral3012g00005 897 ProSiteProfiles TIR domain profile. 13 179 IPR000157 GO:0007165
Pral3012g00005 897 Pfam NB-ARC domain 194 405 IPR002182 GO:0043531
Pral3012g00005 897 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 434 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3012g00005 Pral-Chr3012 66475 69794 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3012g00005 15 785 WRKY Transcription Factor Family AT4G12020 30.740 2.95e-82 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3012g00005 - - ahf:112728432 671.774