Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3009g00006 ATGGCTTTTGTGACTTCTCCATGGCTCCTGGGTTTGGCTTCTCTGGTTTTAGCTTCCCTTCTTTATCGCCTTCTCAACCTCTTCCGGCGGCCTTCTCTTCCTCTTCCTCCCGGTCCTAAACCCTGGCCCATCGTCGGGAACATGCCTCACTTGGGACCTGTGCCTCACCATGCTTTGGCCGATTTAGCTCGGAGTTATGGTCCTCTCATGCACCTCCGCCTTGGCTTCGTCGACGTCGTCGTGGTGGCTTCGGCTTCTGTCGCCGAGCAGATCTTGAAGGTTCACGACGCCAACTTCTCCAGCCGACCTCCCAACGCCGGAGCCAAGTACATGGGTTATAACTATCAAGACCTCGTGTTCGCTCCCTACGGCCCACGGTGGCGCAAGCTCCGAAAAATCTCCGCTGTTCATCTCTTCTCCGGCAAGGCCTTGGAAGATTTCAGACATCTTCGTCAGGAAGAGGTGGGAAGACTGACGCGTAATCTCGCGAGTGCCGCCTCACAAGTGGTGAACTTAGGGCAGTTGCTGAATGTGTGCACCACCAACGCACTCGCAAGGGCAGTTTTAGGACGGCGCGTGTTCGACGACGGTGCTGCCGGATGTGATCCCAGGGCGGACGAGTTCAAGTCGATGGTGGTTGAGATGATGGTGCTGGCCGGAGTTTTCAACATCGGCGACTTCATTCCGGCGTTGGAATGGCTGGACCTTCAAGGAGTTCAAGGCAAGATGAAGAAACTGCACAAAAGATTCGATGCCTTCTTGACGAACATCATCGAAGAACACAGGGTTTCTCAGAACGAGGACCACAGGCACTTGTTGAGCACATTGCTTTCTCTTAAGGAGGCTCAAGATGATGAAGGAACCAAGCTCACTGACGTTGAGATCAAAGCATTACTTCTGAACATGTTTGCGGCCGGTACTGACACGTCATCCAGCACCACGGAGTGGGCCATAGCCCGTGACCCCAAGGAGTGGTCCGACCCGTTGGTGTTCAGACCCGAGAGGTTCTTGCCGGGCGGGGAGAAGGCTGGTGTGGACGTTAGGGGCAATGACTTTGAGGTGATTCCATTTGGTGGTGGGAGGAGGATATGTGCTGGCATGAACCTTGGGCTTCGAGTGGTCCAGCTTCTGACTGCAACTCTGGCCCAGGCTTTTAATTGGGAGCTTGCCGATGGTCTCAGCCCACAAAAGCTCAACATGGACGAGGCTTATGGGCTTACCCTCCAACGGAAGGTCCCTCTGTTGGCCCAGCCAAAGCCCAGGCTTGCACCACACCTGTACTCACAGTCTCCCTAA 1296 0.5509 MAFVTSPWLLGLASLVLASLLYRLLNLFRRPSLPLPPGPKPWPIVGNMPHLGPVPHHALADLARSYGPLMHLRLGFVDVVVVASASVAEQILKVHDANFSSRPPNAGAKYMGYNYQDLVFAPYGPRWRKLRKISAVHLFSGKALEDFRHLRQEEVGRLTRNLASAASQVVNLGQLLNVCTTNALARAVLGRRVFDDGAAGCDPRADEFKSMVVEMMVLAGVFNIGDFIPALEWLDLQGVQGKMKKLHKRFDAFLTNIIEEHRVSQNEDHRHLLSTLLSLKEAQDDEGTKLTDVEIKALLLNMFAAGTDTSSSTTEWAIARDPKEWSDPLVFRPERFLPGGEKAGVDVRGNDFEVIPFGGGRRICAGMNLGLRVVQLLTATLAQAFNWELADGLSPQKLNMDEAYGLTLQRKVPLLAQPKPRLAPHLYSQSP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3009g00006 431 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 357 366 IPR017972 GO:0005506|GO:0016705
Pral3009g00006 431 PANTHER CYTOCHROME P450 98A9 10 319 - -
Pral3009g00006 431 SUPERFAMILY Cytochrome P450 28 421 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3009g00006 431 Gene3D Cytochrome P450 318 423 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3009g00006 431 Pfam Cytochrome P450 316 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3009g00006 431 Pfam Cytochrome P450 36 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3009g00006 431 Gene3D Cytochrome P450 28 317 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3009g00006 431 PRINTS E-class P450 group I signature 314 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3009g00006 431 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3009g00006 431 PRINTS E-class P450 group I signature 364 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3009g00006 431 PRINTS E-class P450 group I signature 354 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3009g00006 431 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3009g00006 Pral-Chr3009 45372 47400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3009g00006 313 427 Cytochrome P450 AT5G07990 73.043 3.83e-57 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3009g00006 K05280 - gmx:547475 468.003