Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3000g00001 ATGAGGGACATATGTGAGCTGATAGATGAGTTAAAACCAGCCATCCTAATGGTTTTGGTTCAGATGCTTTATCTTGGGATTAACATTCTTTACAAACTTGTCGTTGTAGACGGCATGAACTTGCGAATTGTAATTGCATATCGTTTTGTTTTTGCCACTGCCTTTATGGCTCCTCTTGCTTTCATCTTTGAAAGGAAAAAGAGGCCAAAGATGACTTGGACTATACTGTTTCTGGGACTTATATCTGGCTTATTTGGAGGAACATTGTCACAAACATTATATTTGGAGACGTTGGCCTTAACAACAGCAACGTTCGCATCGGCAATGAACAATCTCCTTCCAGCCATGACCTTTGTCATGGCCCTGTTCTTCGGGTTGGAGAAATTGAATTGGAAAGCAGCAGCCGGGAAAGCTAAGATCATCGGGACCTTAATAGGAATTAGTGGGGCCATGCTTCTCACCCTCTACAAGGGTGCACGGATCCCCACTCCTTCCTTCCACGTCACCGTTTTACGCCCTCTAACCAGCCACGTGGCATCTTCCCACTCTTCCTCCGGTGGGAACACGCTCTTGGGTGCACTCGCTGCCGTGGGCGGCATCTCCTCGTTCTCTATGTGGCTCATCGTCCAGAGTAAGATGAGCAAGAGATATCCATGTCATTACTCAAGCACCGCATTGATGAGTTTTGCAGCTTCGGTGTTTTCTGTTGGGTTTGCTCTTTGCAGTGAAAGGGATTGGAATCAATGGAAATTGGGTTGGAACATAAGGCTCTTAACTGTGGCTTATGCAGGATTGGTGCCAGCAGGGGTGAATGTGGTGATGATAGCATGGTGTGTGCACAAAAGAGGACCTCTATTTGTATCAGTGTTTAATCCTCTCTTGCTTTTGTTCTTGGCTTTTGTTGGATCTTTCTTTATGGATGAGATGCTTCACCTCGGAAGTATAATTGGAGGAGTGCTGATAGTGTGTGGATTATATATGGTTTTATGGGGCAAAGCCAAAGAGATGAAGATGATGAATCTTTTGGATGTCCCATCACAGACCCTCCACGTGTCATCCCCTTCAGTTGAGATCATCGTCAAATCCTCCATTGGTGACCAGAAAGGCAACAATCTTAGTGCTTCAAACGTTGTTAACGGGGATCACCAAGATTCATCAGAAAATGGAAATAAAGTAATACGAGATGATGATGGGAAGAATCAAGAGTACATCATATCAAGAAACTAA 1227 0.4442 MRDICELIDELKPAILMVLVQMLYLGINILYKLVVVDGMNLRIVIAYRFVFATAFMAPLAFIFERKKRPKMTWTILFLGLISGLFGGTLSQTLYLETLALTTATFASAMNNLLPAMTFVMALFFGLEKLNWKAAAGKAKIIGTLIGISGAMLLTLYKGARIPTPSFHVTVLRPLTSHVASSHSSSGGNTLLGALAAVGGISSFSMWLIVQSKMSKRYPCHYSSTALMSFAASVFSVGFALCSERDWNQWKLGWNIRLLTVAYAGLVPAGVNVVMIAWCVHKRGPLFVSVFNPLLLLFLAFVGSFFMDEMLHLGSIIGGVLIVCGLYMVLWGKAKEMKMMNLLDVPSQTLHVSSPSVEIIVKSSIGDQKGNNLSASNVVNGDHQDSSENGNKVIRDDDGKNQEYIISRN 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3000g00001 408 MobiDBLite consensus disorder prediction 375 395 - -
Pral3000g00001 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 334 - -
Pral3000g00001 408 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Pral3000g00001 408 Pfam EamA-like transporter family 14 153 IPR000620 GO:0016020
Pral3000g00001 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Pral3000g00001 408 PANTHER WAT1-RELATED PROTEIN 13 342 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3000g00001 Pral-Chr3000 2860 7299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3000g00001 11 337 Nodulin-like Gene Family AT1G25270 44.512 1.75e-95 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3000g00001 - - gmx:100787839 429.098