Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2998g00004 ATGTTCTCAAATTTGTTTTCCGTATTCATTGCTCGCCGTCTATCTACCAGCTCGAAGCTTCCGAACATTTCAAAAATAAACTCCAGGTACAAGAAATCGGCTATCCTACAAGCCCAGAATGCTCTCACTGAATATCTCCATGGCACAAGCTGCTTGCCTTATGTTTATGCCGAGCATATTAGTAAGAACTCTCCTCTTTCGCTTGCTAGTCTCATAGCAAAGGTAGATTTCTCAGCTGTCGCTTTCTCAAAAAATTTCAAGAAATTCCTCAGGTACCACCCCATCAATGAGTTCGAATTTTTTTTTGAAAGCATTGGCATAGACTATAATGATATTTCTGGGTTGTTGCCTTCGAACAAGTTTTTCTTTTCCGAAGATCGGACTCTTCTCGATGCGGCTGGTGCGCTTTCCGAATTTGGGTTTCCGTGGAATGAGTTGGGTAAGTTGTATATGGAGAATAGTTCCATATTTAGGAGTAGTGCGGGAGAACTCAAGTCTAAGCTATCGGAGTTTAAGAAATATGGTTTTTGTAATGTTCATTTAGTTGGTATATGTTTAGCTTTCCCTTACACTTTGAGCGGGGGATGTGAAGTATGTGCTGAAAGCGAAGCATTGTTAAATTTTCTGAAGTTGGTATTTTTGGATTTCGAGCTGGCATTATCTGTTGAGGGAAATATGAATTCATGGCACGAGGTTTGTAGGAAAATTCGGGTATTTTATGATTTAAGTGGTGATAAGGAAAGGTTAGTGGAGCTTGTGGGAAGAAATAAAAACATCTTTCTTGAACATGATGAAGAGGTGTTGATTCAAAAGGTTGAGTATTTCTGTAGATTTGGTGTAAACAACGAGGAGGTAGTTGCTTTGCTTCTTCAGAGCCCAGAATTGTTGAGTCTTAATTTAGACAAGCCAGTGATTAACATAATGAAGTTATTGGAATATTCTGGCTTGGAGACTGAAAATCTGAAGGATGTTAATCAAAAGTATGATCATGTATTGGGGACAAACAAAATTGCTAATCTGCCTCAGGTAATGAGGGCTTTGGACTTACACGAGTGGTTCTTTAATAAAATCAAGGACGGAAATCATCAGTTGCTAATGAAATATATAGCAAGCTACCCTGATGAAGACCGAGCTGAGGAATACCGAAGTGGCTTGGAGATGATTCACGTTTCGAGGACCCCGAATCACACCATGAGTAAACTAAATTTGTTACACAACTGGGGCTTTGGGGAAAATGCTTCAATCTTTGATCTCTTAGCACACTTGCATGGCACTAGTATTGAATTAAAGGAAAGATTTGATTGCCTCCTGAGTTTGGGGATTGGATACTCCAAGCTTTGTAAGATGGTAAGAATGACCCCTAAGATCTTAAACCAAAATGTTCAAACTCTGGAGCAGAAGGTGAATTTCCTCTGTCAGGGAGTGGGATGCTCTTTAGAGTATCTACACACATATCCAGGTTATTTGCTTTTCGGTTTAGAGAACCGCATTAAGCCTAGGTACAGATTTCATACGTGGCTTGCGGAAAAGGGTCTATGTACCAAAGACTATTCCATTGCAAGCTTAGTTGCAACTAGTGAAAAGGCTTTTCTAGCTCGTGTTTACAAAATGCACCCAGCTGCTCCAAAACATTGGTTTGAGCAATTCCGGGTCTAA 1656 0.3992 MFSNLFSVFIARRLSTSSKLPNISKINSRYKKSAILQAQNALTEYLHGTSCLPYVYAEHISKNSPLSLASLIAKVDFSAVAFSKNFKKFLRYHPINEFEFFFESIGIDYNDISGLLPSNKFFFSEDRTLLDAAGALSEFGFPWNELGKLYMENSSIFRSSAGELKSKLSEFKKYGFCNVHLVGICLAFPYTLSGGCEVCAESEALLNFLKLVFLDFELALSVEGNMNSWHEVCRKIRVFYDLSGDKERLVELVGRNKNIFLEHDEEVLIQKVEYFCRFGVNNEEVVALLLQSPELLSLNLDKPVINIMKLLEYSGLETENLKDVNQKYDHVLGTNKIANLPQVMRALDLHEWFFNKIKDGNHQLLMKYIASYPDEDRAEEYRSGLEMIHVSRTPNHTMSKLNLLHNWGFGENASIFDLLAHLHGTSIELKERFDCLLSLGIGYSKLCKMVRMTPKILNQNVQTLEQKVNFLCQGVGCSLEYLHTYPGYLLFGLENRIKPRYRFHTWLAEKGLCTKDYSIASLVATSEKAFLARVYKMHPAAPKHWFEQFRV 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2998g00004 551 Pfam mTERF 219 335 IPR003690 GO:0003690|GO:0006355
Pral2998g00004 551 Pfam mTERF 428 531 IPR003690 GO:0003690|GO:0006355
Pral2998g00004 551 PANTHER CGI-12 PROTEIN-RELATED 40 239 IPR003690 GO:0003690|GO:0006355
Pral2998g00004 551 Gene3D Transcription termination factor 3, mitochondrial 73 219 IPR038538 -
Pral2998g00004 551 Gene3D Transcription termination factor 3, mitochondrial 220 359 IPR038538 -
Pral2998g00004 551 Gene3D Transcription termination factor 3, mitochondrial 365 550 IPR038538 -
Pral2998g00004 551 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Pral2998g00004 551 SMART mt_12 447 478 IPR003690 GO:0003690|GO:0006355
Pral2998g00004 551 SMART mt_12 413 442 IPR003690 GO:0003690|GO:0006355
Pral2998g00004 551 SMART mt_12 479 513 IPR003690 GO:0003690|GO:0006355
Pral2998g00004 551 SMART mt_12 250 281 IPR003690 GO:0003690|GO:0006355
Pral2998g00004 551 SMART mt_12 147 177 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2998g00004 Pral-Chr2998 44018 45810 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral2998g00004 mTERF 4.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2998g00004 - - qsa:O6P43_026967 695.656