Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2993g00001 ATGAAAAGGACAACAGGTTTTCTTCATGGAATCATCCAAAATAACAAATCTGGCCTCACCAAAGCAACCTTCTTCTCATCAATGTCTAAAGATGTTTTGGGCGTTTTGCTGCTCATTTCTAGCTTCTATCTATATTCTGGTTCTTGTATAGATTTCACTGCCTCGTTTCAATTTGTCAGAGACCCTGATACTATCAGCTCAGGAAGCTTCAAACTTGGGTTCTTTAGCCCGGGAAATTCAACCAAGCGCTATGTTGGAATTTGGTATCTATCTGAAACCACAGTCGTATGGGTGGCTAACAGAAACAGCCCTCTCAGAGATTCGTCTGGGGTTTTCACAATTTCTAAAGATGGCAACCTTGTGGTGTTGAATGACCAAAATCTCACACTTTGGTCATCTAATGTGTCAAACATTCCTCCCAATTCATCAATGATGGCTCTGCTTCTAGATACTGGGAACCTTGTTCTGAAAGATAACACCACAGGACAAACACTATGGGACAGTTTTCAGCATCCTTCTGATTCATTCTTTCCAAAAATGAAACTTGGTATAAGCCGAGGAACAGGTGAAAAACCAAAGCTTACGTCTTGGACATCCCCTTCTGATCCATCCATAGGAAGCTTCTCAGCAAGTCTTGAACGCTTGGATGCTCCTGAAGTTGTAGTCTACAATGGATCTAAACCATATTGGCGTTCTGGTCCATGGAATGGACAGGAATTTCTAGGAGTGAAGGCTTCTTCATATCTCGACGGATTCAGTCTAAAAGAATACAATGATACATATTACATCTCCTTTGATCTGGCAAACCCATCTTATTTCGGAGTTTTTAAGTTGAATTCAACAGGAAACTTGGTTGTAACGGGATGGATCAACAAACAGGAAGCTGGAAGATGGAGGATTCAACATAATGAATGCGATATTTATGGTCAATGTGGAGCATTTGCCTTCTGTAATTCCCAGAGTACTCCAGTTTGTAGCTGTTTAGATGGGTTTGAACCGAAGAATCCAGATGAATGGAATAAGCAAAACTGGACAAATGGTTGTATAAGAAAAGCACCATTGCTGTGTGACAAGAGGATAAAAAATGGAATTGAAGATGCGTTCAAGAAAATAGAGAACATGAAAACACCAGATTTTGTAGAGAGATTATTGCAGGTTCCTGAAGAAAATTGCAGTAGGCAATGCTTACAAAATTGCTCGTGTTTGGCTTATGCATATGATGCTGCCATAGGATGCATGTCTTGGAGTGGTAAATTAATTGACATTCGAACAATCGCTTCTGGAGGTGTTGATCTCTACATTCGTCTAGCAAATTCAGAACTCAAAAAACATGAAGAAAATGTAGGTGAACGAAAGAACAAGCGGAAGGTAACAGTGATTGCTATTACTGTGACAGTTGGAGCCACTATTTTTGGTGCATGTTCGTATTTTTTGTGGACAATAATTGTTGCCAGATCAAAAGGAAAAAAGAATCAAAATGGTCTGAGTGAAAGCATGAAAAGAGCGTCAAGACAAGGAAAACTAGAGGAGCTTCCACTGTTTGAGTTTGAAAAGGTTGCAATTGCAACAAACAATTTTCACCAATCTAACAGGCTTGGTCAGGGAGGTTTTGGTCCTGTGTACAAGGGAGAATTGCAAGATTCACAAGTCATAGCCGTTAAAAGACTTTCAAGAGGCTCTGGACAGGGTCTTGAAGAATTTATGAATGAAGTGAGGGTGATATCTAAACTTCAGCATCGCAATCTTGTAAGACTTCTTGGTTGTTGTATTGAAGGAGATGAAAGGATGTTGGTATATGAGTACATGCCAAACAAAAGTTTGGATGCATTGCTCTTTGGTTCAAGGAGAGATTTATTCTTAGATTGGAAAAAACGCTATAATATAATGGAAGGAATTGCTCGTGGACTACTTTATCTTCATAGAGATTCAAGATTAAAAATTATACACAGAGATCTTAAGGCGAGCAACATCTTGTTAGATGAAGAGTTAAATCCAAAAATATCAGACTTTGGTTTGGCAAAGATTTTTAAAGGCGATGAGAATGATCAAGGAAACACCAGAAGGGTTATTGGAACATATGGGTACATGTCTCCTGAATATGCAATGCAAGGACTATTTTCAGAGAAATCAGATGTATTTAGTTTTGGGGTGCTGTTATTAGAAATTGTTGCTGGAAAGAAAAACACTAGCTTCTATCATGAGGAGATGCCCTTAAGCCTATTGGGATTTGCATGGAAACTACGGGTTGAAGATAATATTAAATCCCTAATAGACCGAGATATATATGATCCAAGCTTTCATGTGGAGATCTTGAGATGCATACATATTGGACTTCTATGCGTGCAAGAAGCTGCCAAAGATAGACCAAATATGTCCACTGTATATTCAATGCTTAATAGTGAGATTGTCAATCTTCCTTCACCAACACAACCTGCTTTCACCAAGAGTCAATATACTGTGAGTGCAGAATCGTCTCAACAAAGTGATCCTACTTACTCCATATGTAACACTGTGACGATCACAGAAGTACAAGGAAGATGA 2541 0.3892 MKRTTGFLHGIIQNNKSGLTKATFFSSMSKDVLGVLLLISSFYLYSGSCIDFTASFQFVRDPDTISSGSFKLGFFSPGNSTKRYVGIWYLSETTVVWVANRNSPLRDSSGVFTISKDGNLVVLNDQNLTLWSSNVSNIPPNSSMMALLLDTGNLVLKDNTTGQTLWDSFQHPSDSFFPKMKLGISRGTGEKPKLTSWTSPSDPSIGSFSASLERLDAPEVVVYNGSKPYWRSGPWNGQEFLGVKASSYLDGFSLKEYNDTYYISFDLANPSYFGVFKLNSTGNLVVTGWINKQEAGRWRIQHNECDIYGQCGAFAFCNSQSTPVCSCLDGFEPKNPDEWNKQNWTNGCIRKAPLLCDKRIKNGIEDAFKKIENMKTPDFVERLLQVPEENCSRQCLQNCSCLAYAYDAAIGCMSWSGKLIDIRTIASGGVDLYIRLANSELKKHEENVGERKNKRKVTVIAITVTVGATIFGACSYFLWTIIVARSKGKKNQNGLSESMKRASRQGKLEELPLFEFEKVAIATNNFHQSNRLGQGGFGPVYKGELQDSQVIAVKRLSRGSGQGLEEFMNEVRVISKLQHRNLVRLLGCCIEGDERMLVYEYMPNKSLDALLFGSRRDLFLDWKKRYNIMEGIARGLLYLHRDSRLKIIHRDLKASNILLDEELNPKISDFGLAKIFKGDENDQGNTRRVIGTYGYMSPEYAMQGLFSEKSDVFSFGVLLLEIVAGKKNTSFYHEEMPLSLLGFAWKLRVEDNIKSLIDRDIYDPSFHVEILRCIHIGLLCVQEAAKDRPNMSTVYSMLNSEIVNLPSPTQPAFTKSQYTVSAESSQQSDPTYSICNTVTITEVQGR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2993g00001 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 47 169 - -
Pral2993g00001 846 Pfam PAN-like domain 365 422 IPR003609 -
Pral2993g00001 846 ProSiteProfiles Protein kinase domain profile. 526 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2993g00001 846 SUPERFAMILY Protein kinase-like (PK-like) 511 833 IPR011009 -
Pral2993g00001 846 SMART serkin_6 526 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2993g00001 846 CDD B_lectin 66 172 IPR001480 -
Pral2993g00001 846 CDD PAN_AP_plant 353 437 - -
Pral2993g00001 846 SMART ntp_6 363 436 IPR003609 -
Pral2993g00001 846 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 237 IPR036426 -
Pral2993g00001 846 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 36 789 - -
Pral2993g00001 846 Pfam D-mannose binding lectin 94 197 IPR001480 -
Pral2993g00001 846 Gene3D Transferase(Phosphotransferase) domain 1 602 807 - -
Pral2993g00001 846 CDD STKc_IRAK 532 799 - -
Pral2993g00001 846 Pfam S-locus glycoprotein domain 230 335 IPR000858 GO:0048544
Pral2993g00001 846 FunFam receptor-like serine/threonine-protein kinase SD1-8 497 601 - -
Pral2993g00001 846 ProSiteProfiles PAN/Apple domain profile. 356 437 IPR003609 -
Pral2993g00001 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Pral2993g00001 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 806 - -
Pral2993g00001 846 Gene3D Phosphorylase Kinase; domain 1 500 601 - -
Pral2993g00001 846 Coils Coil 434 454 - -
Pral2993g00001 846 PIRSF SRK 23 846 IPR024171 GO:0004674
Pral2993g00001 846 SMART blect_4 56 172 IPR001480 -
Pral2993g00001 846 Gene3D - 56 170 IPR036426 -
Pral2993g00001 846 Pfam Protein tyrosine and serine/threonine kinase 528 796 IPR001245 GO:0004672|GO:0006468
Pral2993g00001 846 ProSiteProfiles Bulb-type lectin domain profile. 50 169 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2993g00001 Pral-Chr2993 13341 16780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2993g00001 447 813 Receptor kinase-like Gene Family AT4G05200 51.206 6.51e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2993g00001 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2993g00001 - - pcin:129286391 1288.86