Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2992g00010 ATGGGTTGCTGCCCATCGTCATTTCTGACCGAAACTCACCCCGAAAAGCAGCAAAATCAACAGCCCCCTCACCATGTTCACACTCACAACCACATCCATACCCAACCGCACCCTCCTCCTTCTCTGACCGCCGACCCATCCGCCGCCGGTGGGGTTCCTTCTTTCTCCGAGTTCTCTTTCTCCGACCTTAAAGCAGCCACCGATAATTTTAGCTCCGATTTTATTGTGTCTGAGAGTGGAGAGAAGGCACCCAACCTTGTGTACAAAGGGCGCCTCCCCAACCGCCGTTGGATTGCCGTCAAGAAGTTCACCAAGGCTGCATGGCCCGATCCCAAGCAATTCGTGGATGAGGCGTCAGGTGTTGGAAAATTGCGACATAGCAGGCTTGCTAATTTGATTGGCTACTGCTGTGATGGAGATGAGAGGCTACTTGTTGCAGAATACATGCCCAATGACACTCTCGCTAAGCATCTTTTCCATTGGGAAAATCAGACCATTGAGTGGGCCATGCGCTTAAGAGTGGCTCTTTCCATTGCAGAAACTTTAAATTACTGTAGTTCTGAGGGTCGCCCCTTATACCACGATTTGAATGCTTATAGGGTTCTTTTTGATGAGGAAGGTGATCCACGGCTGTCATGTTTTGGTTTGATGAAGAACAGTAGGGATGGTAAAAGTTATAGCACGAATCTTGCATACACACCTCCTGAGTACTTAAGAAATGGAAGGGTCACTCCTGAAAGTGTCATTTACAGCTTCGGTACTGTTCTCCTGGACCTGCTAAGTGGAAAACACATTCCTCCAAGTCATGCACTTGACATGATACAGGGGAAAGCCAACATGCTTCTTATGGATTCACATTTAGAGGGGAAGTTCTCTAAAGAAGAGGCGGCAGTAGTTGTCAATCTGGCCTCTAAATGTTTGCAATATGAACCCAGGGAGCGGCCTGATACAAAGGAATTAGTCACAACACTTGCTCCATTGCAAACAAAACCTGATCATGACGAAGCTCCATCAACACCACAACGCCCTCTCTCAGCCATGGGTGAGGCTTGTTCAAGGATGGACCTCACTGCGATACATCAGATCTTGGTTGCAACGCACTACAGAGATGACGAAGGGACTAATGAGTTGTCTTTCCAAGAGTGGACCCAACAGATGAGGGATATGTTGGAAGCAAGGAAGCGTGGAGACTATGCATTCCGTGACAAAGATTTCAAGACAGCAATTGAAAATTATTCACAGTTTATCGATGTGGGAACAATGGTGTCACCAACAGTTTTTGCTCGGCGTAGTCTGTGTTATCTGTTATGCGATCAACCCGATCCTGCACTGAGAGATGCAATGCAAGCACAATGTGTTTCTCCAGACTGGCCTACAGCATTCTACATGCAATCAGTTGCTTTAGCAAAGCTGGATATGCAAAAGGACGCTGCTGATATGTTGAATGAGGCTACTGCTTTGGAAGAAAAGAGGCAAAGAGGAGGCAGAGGCGCATAG 1497 0.4736 MGCCPSSFLTETHPEKQQNQQPPHHVHTHNHIHTQPHPPPSLTADPSAAGGVPSFSEFSFSDLKAATDNFSSDFIVSESGEKAPNLVYKGRLPNRRWIAVKKFTKAAWPDPKQFVDEASGVGKLRHSRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALSIAETLNYCSSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKANMLLMDSHLEGKFSKEEAAVVVNLASKCLQYEPRERPDTKELVTTLAPLQTKPDHDEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIENYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVSPDWPTAFYMQSVALAKLDMQKDAADMLNEATALEEKRQRGGRGA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2992g00010 498 MobiDBLite consensus disorder prediction 1 49 - -
Pral2992g00010 498 Gene3D Tetratricopeptide repeat domain 387 495 IPR011990 GO:0005515
Pral2992g00010 498 Gene3D Transferase(Phosphotransferase) domain 1 150 337 - -
Pral2992g00010 498 SUPERFAMILY TPR-like 390 491 IPR011990 GO:0005515
Pral2992g00010 498 FunFam probable serine/threonine-protein kinase At4g35230 45 148 - -
Pral2992g00010 498 FunFam probable serine/threonine-protein kinase At5g41260 150 339 - -
Pral2992g00010 498 MobiDBLite consensus disorder prediction 10 25 - -
Pral2992g00010 498 Coils Coil 470 490 - -
Pral2992g00010 498 SUPERFAMILY Protein kinase-like (PK-like) 54 334 IPR011009 -
Pral2992g00010 498 ProSiteProfiles Protein kinase domain profile. 73 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2992g00010 498 FunFam probable serine/threonine-protein kinase At4g35230 387 496 - -
Pral2992g00010 498 Gene3D Phosphorylase Kinase; domain 1 48 148 - -
Pral2992g00010 498 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 24 493 IPR045845 GO:0004672|GO:0009742
Pral2992g00010 498 Pfam Protein tyrosine and serine/threonine kinase 88 324 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2992g00010 Pral-Chr2992 28972 35602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2992g00010 58 332 Glycoside Hydrolase AT3G07070 36.242 3.93e-45 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pral2992g00010 PK_Tyr_Ser-Thr 6.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2992g00010 K14500 - qsa:O6P43_011400 871.307