Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2990g00021 ATGGAGAGTTTCATAAACAACTCATTATCAAGGCCGATTCATGTGTATCTAAGTTTTAAAGGAGATGATGAAAGCTGCGAATTCACAGATAGGCTTTGGGCTTCTCTAGAAACTGACGATTTAAATACATTTTGGGATGGCAAGAAACTCGAGACAGGTTTTTCTAGCATTCCGCATCACTTTCTCAAAGCAATTCAACAGTCATGTGTTTCCATTGTCGTCTTCTCCAGAAACTATGCCTCTTCTATATGGTGCCTTGAGGAACTTTCTAAGATTGCTGAGCGCATTCATGAACCACGATATACTATTCTCCCAATCTTCTATGATGTAGATCCATCTGAGGTACAAAACCAGAGTAATTCTTTCCAGCAAGCTTTCGTTGATCATGAACAGAGGTTTGCAGCAAATTTACGCAAAGTACACACCTGGAGTTTAGCGATGAAACGAGTGGCCAATCTCTTTGGTTGGCATGTACAGCATGAGTTAGGGCCACAAGTTATTGATGATATCATAATAAAGGTCAAGAGAAGAATGCGTGAATTAGTTTATGTTGACGTAGATCTGGTAGGGATGAAATCTCGGGTGAATGACGTAGAAAAACTTCTCGACTTGGGTTCAAATGATGGGGTTCGAGTTCTGGGCATTTGTGGAATGGGCGGAATAGGGAAGACAACTCTTGCCCGAGTTCTATATGATAGGATCTCTTACCGCTTTGATGCTTGTTATTTTCTACCTAACCTATCTGAATTTTATACCAGGAGACTAGCATGTGGAAAGATTATTCTCATGATTCTCGATGGCATTGATAAGAACCAAAATCTAATGCCCCTAATCAAGCCTATAAGAACTAATTGGTTAGGTGGAGGAAGTAGAATTATCATAACAACCAGAGATGAAAGAGTCCTTAAAATCTTTGGGAAGTATGATATCTATCGGGTTAATCCATTGGCCAAGGATGAAGCTCTTAAATTATTTTGCAGAAAAGCTTTCAAATGTGATCTTCATGCCAGAGATTATGAGCAGCAAATAAATAGTGTACTCCAATTTGCTAATGGCCTTCCATTAGCAATTATGATATTGGGCTCATTATTGTATAATAGAAGAGTCTCAGAATGGGGAAGTACTTGGGTTGAAATAAAAAAGGTTGCTACCCAGATGATCATGAAGGTACTCAAAAAGAGTTTTGATGAACTGGATCGTGACAGCAAGGAAATATTTCTCGACATTGCTTGTTTTTTCAGAGGGAAGAAGATTAAACATGTAAAAGGAATTTTAAATAGTTATAGATTTCTTGATCAAAAGAAAAATACCCCAGTGAAGGAGGAAATACAACTTTTAATTGAAACATCACTCATAACCATTATAGATCAAAAAATAGAAATGCATGGTCTATTGCAAGAAATGGGAAGAGAAATTGTTCAGCTTAATTTCCCTTCCATGCCAGAAAGGTGGAGTAGATTGTGGGATTTCAATGATATTTTTCGTGTTATGCAAAATGACACAGCTTCCCGAGTAGTTCAAGCAATAGTCCTGGATTTAGAAGATTCACAGCAAAGGGCATTAAGGGTCCAAGCTTTATCAAATATGGGCAATCTTAAACTACTCATATTTCGTAACGTTAAGTTTTGTGGATCCCTCAAGCATCTTTCAAATGAGCTTCGATATGTTTCATGGCACCAGTATCCTTTCCCTTGTTTACCGTCAAGTTTTGTGCCACATAATCTCATTGAATTGATTTTGCCTGATAGCTCCATCACAAACATATGGGAAGGAGAAAAGGCACCAGATAGCTCCATCATAAATACAAGGGCAGTAAAACCAAAAGTAGCTGTATGCTAA 1839 0.3796 MESFINNSLSRPIHVYLSFKGDDESCEFTDRLWASLETDDLNTFWDGKKLETGFSSIPHHFLKAIQQSCVSIVVFSRNYASSIWCLEELSKIAERIHEPRYTILPIFYDVDPSEVQNQSNSFQQAFVDHEQRFAANLRKVHTWSLAMKRVANLFGWHVQHELGPQVIDDIIIKVKRRMRELVYVDVDLVGMKSRVNDVEKLLDLGSNDGVRVLGICGMGGIGKTTLARVLYDRISYRFDACYFLPNLSEFYTRRLACGKIILMILDGIDKNQNLMPLIKPIRTNWLGGGSRIIITTRDERVLKIFGKYDIYRVNPLAKDEALKLFCRKAFKCDLHARDYEQQINSVLQFANGLPLAIMILGSLLYNRRVSEWGSTWVEIKKVATQMIMKVLKKSFDELDRDSKEIFLDIACFFRGKKIKHVKGILNSYRFLDQKKNTPVKEEIQLLIETSLITIIDQKIEMHGLLQEMGREIVQLNFPSMPERWSRLWDFNDIFRVMQNDTASRVVQAIVLDLEDSQQRALRVQALSNMGNLKLLIFRNVKFCGSLKHLSNELRYVSWHQYPFPCLPSSFVPHNLIELILPDSSITNIWEGEKAPDSSIINTRAVKPKVAVC 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2990g00021 612 ProSiteProfiles TIR domain profile. 11 178 IPR000157 GO:0007165
Pral2990g00021 612 Gene3D - 178 249 IPR027417 -
Pral2990g00021 612 Gene3D - 250 308 IPR027417 -
Pral2990g00021 612 Pfam TIR domain 14 162 IPR000157 GO:0007165
Pral2990g00021 612 Pfam NB-ARC domain 259 397 IPR002182 GO:0043531
Pral2990g00021 612 PRINTS Disease resistance protein signature 212 227 - -
Pral2990g00021 612 PRINTS Disease resistance protein signature 350 364 - -
Pral2990g00021 612 Gene3D - 316 399 IPR042197 -
Pral2990g00021 612 Gene3D - 10 177 IPR035897 -
Pral2990g00021 612 SMART till_3 12 153 IPR000157 GO:0007165
Pral2990g00021 612 SUPERFAMILY L domain-like 501 591 - -
Pral2990g00021 612 SUPERFAMILY "Winged helix" DNA-binding domain 387 497 IPR036390 -
Pral2990g00021 612 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 588 IPR044974 GO:0006952
Pral2990g00021 612 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 409 IPR027417 -
Pral2990g00021 612 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 156 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2990g00021 Pral-Chr2990 77229 79342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2990g00021 64 594 WRKY Transcription Factor Family AT4G12020 28.696 1.17e-54 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2990g00021 - - pcin:129316386 694.501