Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2990g00019 ATGAGAGTGACAGAGGAGAGTTGCATCGGTGGATCATCATCATCAAGGCCAATCCATGTTTATCTAAGTTTCAAAGGAGATCATGAAACTTGCCGATTCACAGATAGGCTTTGGGCTGCTCTTGAAAGTGACGATTTAAACACCTTCTGGGATGACAAGAAGCTTGACCCAGGTGACTCCATCATTCTCCCACCTCACTCTCTTAAACCAATTCGACAGTCCAACATTTCAATTGTTGTCTTCTCCAAAAACTATGCTTCTTCTATATGGTGCCTTGAGGAGCTCTCTGAGATCGCCGCACGCATTCATGAAACCCGATATACTGCTTTCCCAATTTTCTATGATGTCCATCCATCTGAGGTTCAAAACCAGAGCAACTCTTTTGAAACAGCTTTTGCTGGACATGAACAAAGGTTCACAGCAAATTTGCGCAAGCTACACAATTGGAGGTCAGCAATGAAACAAGTGGCCGATCTCTCTGGTTGGTGTGTACCGCTAGAGCCAGAGCCGCAAGTTATTGATGACATCATCAGGGAGGTCAAGAGAAAAATGCGTGAATTATTTTATGCTGATGTAGATCTAGTAGGGATGCAATCTCGAGTGAGAGAAGTAGACGAACTTCTGGATTTGGGTTCAAAAGATGACACTAGAGTTGTGGGCATCTGTGGTATGGGTGGAGTAGGGAAGTCAACTCTTGCGAGAGTTCTTCATGACAGGATCTCTCATCATTTTGATGCTTCTTATTTGGTACTCAATGCCTTTGAGTTCGATAAGGCATTAATGCTAAGAAATCCCAAGAGAACTCTCATAGTTCTCGATTGTGTTAATATTGATATTGTTTTAGGATTGGTTACTTCGGTAAGAGAAAACCAGTTAGTTGGAGGGAGTAGAATCATCATAACAACTAGAGATGAAGGAGTGCTTGGAATGTTTATGAAGTGTTATATTTATAGGGTTAAACTACTGACCAAGAACGAAGCTCTTCTATTATTTTGTAGAAACGCTTTCAAATGTGATTTTCCAATAAGAGGTTATGAGGAGCAAATAAATAGTGTGCTCCAATATGCTAATGGCCTTCCATTAGCAATTGTGGTAATGGGCTCGTTGTTATATAATACAAGAGTCTCAGAATGGAGATCTGCTTTGGTTGCTATCAAAAAGGCTGCTTTCCGTATTATCATGAATGTCCTCATAGAAAGTTTTGATGATCTGAATTTTGACGCCAAGCAAATGTTTCTAGACATTGCATGCTTTTTCACTGGGAAAGAGATTAAATTTGTGGAAGGAATTTTGGACAGTACTCAGCCAGTTTTATATAGTTATGGCCATCGAGGGAAGTACTATATGCAAATTTTCATCGACAAGTCACTCATGACCATTATAGATCAAAAGGTACACATGCATGGTTTAGTGCAAGAAATGGGACGAGAAATTGTTCGGCATAGATTCCCTGGTAAGCCAGAAAGGTGGAGCAGATTATGGGATTTTGATGATATTTATGATGTTATGCAAAGTGGCAGAGCTATCTATGAAGTTGAAGCAATAGTCTTGGAGTTAGAAAATTCACATGGGAGTACATTGAGAGTTGAAGTTTTTGCCACATCAGCGATTCCCCTGGTTGAGAAACTTGAATCTTAG 1638 0.4017 MRVTEESCIGGSSSSRPIHVYLSFKGDHETCRFTDRLWAALESDDLNTFWDDKKLDPGDSIILPPHSLKPIRQSNISIVVFSKNYASSIWCLEELSEIAARIHETRYTAFPIFYDVHPSEVQNQSNSFETAFAGHEQRFTANLRKLHNWRSAMKQVADLSGWCVPLEPEPQVIDDIIREVKRKMRELFYADVDLVGMQSRVREVDELLDLGSKDDTRVVGICGMGGVGKSTLARVLHDRISHHFDASYLVLNAFEFDKALMLRNPKRTLIVLDCVNIDIVLGLVTSVRENQLVGGSRIIITTRDEGVLGMFMKCYIYRVKLLTKNEALLLFCRNAFKCDFPIRGYEEQINSVLQYANGLPLAIVVMGSLLYNTRVSEWRSALVAIKKAAFRIIMNVLIESFDDLNFDAKQMFLDIACFFTGKEIKFVEGILDSTQPVLYSYGHRGKYYMQIFIDKSLMTIIDQKVHMHGLVQEMGREIVRHRFPGKPERWSRLWDFDDIYDVMQSGRAIYEVEAIVLELENSHGSTLRVEVFATSAIPLVEKLES 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2990g00019 545 Gene3D - 321 405 IPR042197 -
Pral2990g00019 545 Gene3D - 12 184 IPR035897 -
Pral2990g00019 545 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 162 IPR035897 -
Pral2990g00019 545 SMART till_3 17 159 IPR000157 GO:0007165
Pral2990g00019 545 SUPERFAMILY "Winged helix" DNA-binding domain 393 503 IPR036390 -
Pral2990g00019 545 PRINTS Disease resistance protein signature 218 233 - -
Pral2990g00019 545 PRINTS Disease resistance protein signature 356 370 - -
Pral2990g00019 545 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 521 IPR044974 GO:0006952
Pral2990g00019 545 Pfam NB-ARC domain 201 249 IPR002182 GO:0043531
Pral2990g00019 545 Pfam NB-ARC domain 265 391 IPR002182 GO:0043531
Pral2990g00019 545 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Pral2990g00019 545 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 415 IPR027417 -
Pral2990g00019 545 Pfam TIR domain 19 183 IPR000157 GO:0007165
Pral2990g00019 545 Gene3D - 185 263 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2990g00019 Pral-Chr2990 63265 65544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2990g00019 195 495 WRKY Transcription Factor Family AT5G45050 32.344 6.48e-36 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2990g00019 - - pcin:129316386 601.282