Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2988g00003 ATGGCTCCTTCCTTGAAATCCGACTCCATCCTCACCAATGGCGAATCAAACCACCTCAAACAACCACATGCAGGGCACGTGCAAGAGGACGAAGAAAGCTTCCTCTCCGCCATGCAACTGGTCTCCTCCTCTGTTCTCTCCATGTCTCTGCAAGCCGCCTTCGAGCTCGGCGTCTTCGACGCCATCGCCGGAGCCGGAGAGGGCGCAAGCCTCTCTGCAAAGGACATCGCCGCCGCGGTATCATGCAAGAACCCAGAAGCCCCAACAATGCTCGATCGACTCCTTAGCCTCCTGGCCAGCCATTCTGTGCTTCACTGCTCCGTCGTCGACGATCAACAAGGAACAAAACAGAGGATTTACAGTCTCTCCCCTGTTTCTAAGTACTTCGTGTCGGATGCTAATGGCGTCTCTCTGGGAAATCTCTTGTCCCTGGTCCAAGACAGAGTCTTCCTGGAAAGCTGGAGGGAGCTGAAGGGAGCGATAAAGGAAGGAGGGATAGCATTTAACAGAGTATATGGGATGCATGCGTTTGAGTATCCAAGTAAAGATGGGAGGTTCAACGATGCGTTTAACAAGGGAATGCATGATTCGACAATTCTGATAACGAGCAACATCCTTAAATTCTACAATCGATTTGAGGCATTCGACAGAGTCGTAGATGTTGGGGGTGGTCTTGGCATCAATCTTAACTTGATCACTTCCAAGTATTCTCACATACAGGGCATCAATTTTGACCTTCCGCACGTCATCCAAAATGCCCCTACCTACCCCCGTGTGCAGCATGTGGGAGGAGACATGTTTGAGAGTGTTCCTCAAGGACAAGCCATTTTTATGAAGTGGATACTGCATGATTGGAGCGATGAACACTGCGTGAAGCTGTTGAAGAATTGCCACAAGGCGATTCCGGAAGATGGAAAAGTGATTATAGTGGACGCCATTCTGCCGGATGAACCAAACACCACTCCTGCTGTCCAAACGGCTCTTCAGGGAGACGTCCTCATGATGACCCAAAACCCTGGAGGCAAAGAACGAACCCAGCAGGAATTCCTGGATTTGGCTGCTCATTCTGGGTTCACTGGGATCCGATTCGTCTGTCGGGTTTGCGGATTCTGGGTCATGGAGTTCTACAAGTGA 1134 0.5062 MAPSLKSDSILTNGESNHLKQPHAGHVQEDEESFLSAMQLVSSSVLSMSLQAAFELGVFDAIAGAGEGASLSAKDIAAAVSCKNPEAPTMLDRLLSLLASHSVLHCSVVDDQQGTKQRIYSLSPVSKYFVSDANGVSLGNLLSLVQDRVFLESWRELKGAIKEGGIAFNRVYGMHAFEYPSKDGRFNDAFNKGMHDSTILITSNILKFYNRFEAFDRVVDVGGGLGINLNLITSKYSHIQGINFDLPHVIQNAPTYPRVQHVGGDMFESVPQGQAIFMKWILHDWSDEHCVKLLKNCHKAIPEDGKVIIVDAILPDEPNTTPAVQTALQGDVLMMTQNPGGKERTQQEFLDLAAHSGFTGIRFVCRVCGFWVMEFYK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2988g00003 377 Gene3D Vaccinia Virus protein VP39 131 377 IPR029063 -
Pral2988g00003 377 FunFam Caffeic acid O-methyltransferase 130 377 - -
Pral2988g00003 377 Pfam O-methyltransferase domain 154 358 IPR001077 GO:0008171
Pral2988g00003 377 MobiDBLite consensus disorder prediction 1 19 - -
Pral2988g00003 377 PANTHER O-METHYLTRANSFERASE 37 375 IPR016461 GO:0008168
Pral2988g00003 377 FunFam Caffeic acid 3-O-methyltransferase 15 129 - -
Pral2988g00003 377 SUPERFAMILY "Winged helix" DNA-binding domain 29 132 IPR036390 -
Pral2988g00003 377 Pfam Dimerisation domain 48 99 IPR012967 GO:0046983
Pral2988g00003 377 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 38 377 IPR016461 GO:0008168
Pral2988g00003 377 CDD AdoMet_MTases 217 314 - -
Pral2988g00003 377 Gene3D - 16 129 IPR036388 -
Pral2988g00003 377 PIRSF O-mtase 15 377 IPR016461 GO:0008168
Pral2988g00003 377 MobiDBLite consensus disorder prediction 1 28 - -
Pral2988g00003 377 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 376 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2988g00003 Pral-Chr2988 22969 25483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2988g00003 30 377 Monolignol Biosynthesis Gene Families AT5G54160 51.437 5.91e-132 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2988g00003 K13066 - qsa:O6P43_027445 452.21