Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2987g00006 ATGGGTCCTGATTCTCCAACTTCCCTCGCTCCCGGCTTCCGATTCCACCCCACCGACGAAGAACTCGTTCGTTACTACCTCCGACGCAAGGTCTCCGGCAAATCCTTTCGCTTCGACCCTATCGCCGTTGTTGACATCTATAAATCCGAACCCTGGGACCTCCCATGTCAGTCGAAGCTGAAAAGCAGGGACTTGGAGTGGTACTTCTTCAGTGCGCTGGACAAGAAGTATGGAAATGGGTCGAAGACGAATCGGGCCACTGAGAAAGGATACTGGAAGACTACAGGCAAGGATCGCCCAGTTCGTCACAGCTGTCGTAACGTCGGAATGAAGAAGACCCTCGTTTATCATAGTGGGCGGGCGCCGCGCGGTACCCGTACCAATTGGGTCATGCACGAGTACAGATTGGCTGATGAAGAATTGGCAAAAGCCGGAATACCACAGGATGCGTTCGTACTCTGTAGGATTTTCCAGAAGAGTGGTACTGGTCCAAAGAATGGGGAGCAGTATGGTGCCCCCTTTCTAGAGGAGGAATGGGAAGATGATGATGTTGCTGTGGCTTCACTCCCCGGAGATGAGGCCGCAGCTGATGAAATAATGGTTCGTGAAAATGCTTTTGTTGAAACGGATGATCTTGACCAGTACCTTGATACGGGTGTGGCATCTGAAGGTGCTGGCCATGCTTTAAACGTCCATCATGGGGAGTGCAGCAGTTATCCTGAGGGTTCCCAAGAATTGATTGAAGATCAAAAGCCCTTGGTAGGAACTGCTCAAACTTCTGAGGCTCGAGATGACTTTTTATTGAATAAGCCTGCGCAATATGCTTCAGTTAGCAGTCCAGTGATAGATGGCATCAAGGCTGAAGCAAGTCACGAAGGATATATCTTGAGTCACAATCGTACATTTGATGGGAGATGCTTGGATGCCACTGGGGGGTCTTTCCTGGAAACCGATGATCTGGTGAATCCTGCTGAGGCAAATCCTGCTGATACTGATGTACTAGAAGAGTATCTTGTGTACTTTAATGACGGTGATGATATTTCCCAGTATATCTCTTTCGATTCTCCTGAGTTGGCAGGGAGTGAAAACCCTGATGCTGACCAAAGATCACCTTTAACGCCACCGAATGTGGGCAGAGAATCTAAGGATACTCTCATGGCAAGTAAAATTGATGCGGAAGCCCATTCCAGCGAAGAGGCTTCTTTGAAGCAGCATCTAGAGGCATCAAATTTGGTTTCAGGAAATACACACCCATTTATGAAGCAGGCCAATCACTTGTTGGGCAGTACTGCTGCTTCCCCTGCATTTACTTCAGAGTTCCTGCCTAAAGAAATTGCGCTTCGTCTTCATTCCACGGGTGAATGTTCCAATTCAGCTGATGTAACTGCAGGTATGATCAGAATAACAGACTTCAGTGTAACAGGCAACAGGATGAACTGGATGCGGGGCAAAAATGGAGAGTTCAGTTTTGTAATCTCATCTTGCTTTTGGCCTGCTGTTAACTCTGTTGATTTAGTGCCCATTTCTGGTTTACTCTCTGGGAAGTCTGCATTTGTAGTATCACACGGCTGGATTTACTTAGTCTTCTTTTCAGTGCTGATTCTTTCACTGAGTTTCAAGATTGGAAGTTTCATGTATGCCAGTAAATGA 1650 0.4733 MGPDSPTSLAPGFRFHPTDEELVRYYLRRKVSGKSFRFDPIAVVDIYKSEPWDLPCQSKLKSRDLEWYFFSALDKKYGNGSKTNRATEKGYWKTTGKDRPVRHSCRNVGMKKTLVYHSGRAPRGTRTNWVMHEYRLADEELAKAGIPQDAFVLCRIFQKSGTGPKNGEQYGAPFLEEEWEDDDVAVASLPGDEAAADEIMVRENAFVETDDLDQYLDTGVASEGAGHALNVHHGECSSYPEGSQELIEDQKPLVGTAQTSEARDDFLLNKPAQYASVSSPVIDGIKAEASHEGYILSHNRTFDGRCLDATGGSFLETDDLVNPAEANPADTDVLEEYLVYFNDGDDISQYISFDSPELAGSENPDADQRSPLTPPNVGRESKDTLMASKIDAEAHSSEEASLKQHLEASNLVSGNTHPFMKQANHLLGSTAASPAFTSEFLPKEIALRLHSTGECSNSADVTAGMIRITDFSVTGNRMNWMRGKNGEFSFVISSCFWPAVNSVDLVPISGLLSGKSAFVVSHGWIYLVFFSVLILSLSFKIGSFMYASK 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2987g00006 549 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Pral2987g00006 549 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 232 - -
Pral2987g00006 549 MobiDBLite consensus disorder prediction 355 381 - -
Pral2987g00006 549 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Pral2987g00006 549 FunFam Nac domain-containing protein 86 18 162 - -
Pral2987g00006 549 SUPERFAMILY NAC domain 8 159 IPR036093 GO:0003677|GO:0006355
Pral2987g00006 549 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2987g00006 Pral-Chr2987 42342 46087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2987g00006 1 547 NAC Transcription Factor Family AT5G04410 42.393 7.49e-135 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral2987g00006 NAM 7.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2987g00006 - - qsa:O6P43_008640 597.43