Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2985g00008 ATGTCCGTCAATCAATCAAGGTCCGATAAGAGCGACAATCATTACCGTAAATCCGGGCGATCAGGGAGCTTCCATCAGCAGCGAGGTTCCTCAGGCACGTACGTTAAGGGCGGTGGCGGCGGGCCCGCGCCTTCTCCCGGGATCACTTCGGGTTCCTCACAGCCCTCTAATCGGAGTTTTAAGAGGTCTAATAATCCACATGGTGGGCAATCTAGGGTAAACCCTCCCCCTGTGAATTCAGCCGAGTCTAATAGTGCTTCTACAGGCCGGACGATACCAAATGGCGCTCATTTACAACAATCACCTGGAGCCTCTGATGCGCCAGGTACAAATGCAGCTGCCAAGTCATCTGAAGCCTCATCTGTACAGAAGAGCTTCAGAGTTGTTCCAAAGGCTCCAGCTCCTCGACCTACCACCATAAATTCTGATACAGCAGCTCCTACAACCCCTACCAAGGTCCCTGGAGATTCATCCAAGCCATTTGCTTTTCAATTTGGGTCCATTAGCCCCGGTTTCATGAATGGGATTTCAGTTCCTGCACGCACAAGCTCAGCTCCTCCAAATTTGGATGAGCAGAAAAGAGGCCAGGCTCGTCATGATTCTTTTAGATCTGCACCTTCAGCGCCAACACCTCCACAACAGCTACCACCACGGAATGATGGTGGTGTTACTGACCAATGTAATGCTGGGGAAGCTCATTCAGTGAACAAGGTGAAAAAGGAGGAGCAGGCATCAGCTTTGCCCCCATCAAGCCAGGTGCAAAAGCCATCTGTTGCCATGACTGGGATTTCAACAGCAATGCCATATCATCACCAATCACAGGCACCTGTACAGTTTGGTGGTCCTAACCCACAGATTCTATCTCAGGGAATGTCAGCAGCATCTCTTCAGATGCCTATACCAATGCATTTACCTATGGGAAATGTTGCACAAGTACAACAACAGGTTTTTGTTCCAGGTCTTCAACCTCTGCCTATTCATCCACAGGGAATTATGCATCAAGGCCAAAACTTAAGTTTCAGTTCTCAAATGAGTCCTCAATTGCCCCATCAGTTAGGTAGCATGGGTATTAACCTGAACCCACAATATCCCATGCAGCAAGGTGGAAAATTTGCTGGTCCCCGCAAAACTACCACTGTCAAGATTACTCATCCTGAGACACATGAAGAGCTGAGGCTGGATTTTGAGAAAAAGGAAGATTCACATTCAGATGGCACCTCATCAAGTGTCAGGTCTTATCCTAGTATTCCTTCTCAGCCTCAACCTGTTCAGTCATTTGCCACCTCTCATCCCTTAAACTATTATCCATCTAGCACTTACAGTAGCAGCTCTCTTTATTTTCCACCCACTTCTGTTCCTTTACCAAGCAGCCATATAACTCCTAATTCTCAGCAACCAAGATTTAATTATCCAGTCAATCCAGGCCCCCAAAATGCAGGTTTTAACAATCAATTATCTATTGGTTCCTTTCCTGTTAATAAAACTGGTGCTTCTGTTCATGGCCTCGGGGAAACACCAAATCTGGAACATTCTCGTGGCGTGCAGAAAGGGATTTCATCAACTATATCTGGACTAACTCATGCTGGCATCAAACCAAGTGGGACCTCTGGTGTTAAAGCAAGTGAATCTCCTAGCTCTTTAGGGGCATCTATTGATGTTGGCTTGACTCAGAAAGGGTCTGATAATTGTTCTGAGACATTGTTACATCAGTCTAAATCATCTAGCGATTCTTTTGTTGCAAGGTCATTGCCAAAACAACCTGCTGCAGGGCCTGCTGAGAAGCTGGCATCTACTCCCTTGATGCCTTCTCCAGCTTCTTTGAGTGACAATTCTGCCTCAGATTTGTCCAACAATGAAGGAAGAAGGAATGAATCTCTTAGCAGGTCAAACTCTATGAAAGATAATCAAAAGAAAACAGGGAGGAGAGGGGAATCTTCGCATCAGGTTCCTGTGCTATCTCCTGCTGTGGTTGTTGTACCTTCTCAATCTGTTGATAGTGCTATGCCTGATCGTGAAATTTCTGATACTGTGGGAAATAAAACAAAGCCTTGTGCAGCAATAACCACTGAAGATATCTCTAGCACACCAGAGGCGTTATCAGTTACAGCTAACAGTGGTATTGTTCCTGATGCCAATGAAATGAACATTGACCCTTCTGCTGAAAATTTTGTTTGCATTCCAGCTGAAGGAGTTGGTGCTTCAGCTGTTGATGGCTTGGAAAATCATGAGCATGAGAAGCTAGAGGAATCATCACAGCAGGATAAACCGGAAAAGATGGATGTTTTTGAAATGGGTAATAAAAATGATGGATCTGAAGTATTTAAACAAAAAGGTGATGGTGATGGGATGAAATTTGAAGAAAGAAAACATGGCGCAGCAAAGGAATTGCAAGATGTACAACAGAGACCGGAATTGCAGGATGAATCTACAGATTGTAGATCAGCATGTGAGATGACAAGCGATAGTTTAGGTGTGTCTACCGCAGATGATTTGGATTCTAGAGATATCTCTTTAAATAGAAATGATAGTACAGTTAGTAATGAATCTATTTCTACAACTTCTGCCACATCTGATAACAAGGATTGTTCAGAGAATGCTGAGAGTGGCTCAGTTTCCCTTCCAACATCATTTAACAAGGATAGACCTATTTTGGAGCCAAACAAGGTGAAAACTATAGCCAAAGGAAAGAAGAAAAGAAAGGAGACCCTTCAGAAAGCAGATGCTGCCGGGTCAACTTCTGATCTTTATAATGCATACAAGAGACCTGAGGAAAAGAAAGAAGTTGTGAGTACAGAGAGCAAAGAAATTACTTCTCCGGGAAGGTTAAAGCAGTTGCCTAATGAGGCTGCTCAATCAGATGCTATTGCAACTGTGAAAGATGGACATGACAATGCTGAGCCTGATGACTGGGAGGATGCTGCTGACATGTCTTCCCCAAAATTAGAAGTTGTGGGTACAACTCAACAGGTCAGTGATGGGAGTGAACTTACAGCGAAAAAATACTCCAGAGATTTCCTTTTGAAATTTGAAGAGCAATATGTTGATCTTCCTGAAGGTTTTGAAATTACAGCAGACATTGCTGAGGCTCTGATGAATTCAAATATTACTGGTTCTCATGTTGAACGTGATTCACATCTTAGTCCAGGAAGAATTATGGATAGGTCTGGTGGGATGTCTCGAATGGACCGACACGGGTCTGGGCGTTTTGAAGAAGACCGGTGGGGTAAAATCCCTGGACCTTTTAATTCAGGACGTGACACTCGTATGGATGGCTTTGGAGGTAATGCTGGATTTCGACCTGGTCAAGGAGGCAATTTTGGTGTTTTGAGGAACCCCCGTGTGCAGGCACCTCTGCAGTATGCTGGAGGAATCCTTTCTGGACCGATGCAGTCAATGGGAAATCAGGGAGTTACGCAAAAGAATAGCCCTGATGGTGAGAGGTGGCAACGAGCAACTAACTTCCAGCAGAGGGGTTTAATTCCGTCTCCTCAAACCCCACTTCAGGTGATGCACAAGGCTGAGAGAAAGTATGAGGTGGGTAAGGTGACAGATGAGGAACAAGCAAAGCAGAGGCAGTTGAAGGCCATTCTGAACAAGTTAACTCCTCAGAATTTTGAGAAACTTTTTGAGCAGGTTAAAGCGGTGAATATTGACAATACTGACACGCTTAATGGTGTAATCTCTCAAATATTTGAGAAAGCTCTAATGGAGCCAACCTTCTGTGAAATGTATGCCAATTTCTGCTTACATCTAGCTGCTGTGTTGCCAGATTTTGGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGGGAGCAAGAAGAAGCTAATAAGAATGATGAGGGTGAGGTCAAGCAGTCTGCTGAAGAGAGGGAAGAGAAACGAATTAAGGCAAGAAGGCGCATGTTAGGTAATATAAGATTGATTGGAGAATTATATAAGAAAAAAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTGGGATCGTATGAGGACCCTGATGAGGAAGATATTGAGGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATAATTGATCATCCCAAAGCCAAGGAACACATGGATGCATATTTTGAAAGGATGATATTGTTATCAAAGAACATGAATTTATCTTCTCGAGTGAGATTCATGTTGAAGGATGCTATTGATTTGAGAAAGAATAGATGGCAACAGAAACGGAAAGTTGAGGGTCCGAAAAAGATTGAGGAGGTTCACAGGGATGCTGCCCAAGAGAGGCAGGCCCAAACTGGCAGGCTAGGACGTGGTCCAGGCAATGCTGCATCATCAAGAAGGATGCCTATGGATTTTAGTCCAAGAGGGTCGTCTATGTTTTCTCCTACTAACAACCCTATGGGGCTGCGTGCGCCACAGGTTCGCGGTGGTGGTTCTCAGGATGTTCGTCAAGACAATAGACTATCATATGAGGCTAGAAATTTGTCTGTTACTTTGCCTCAAAGACCTTTAGGTGATGATTCAATAACCCTGGGACCACAAGGTGGTCTTGCAAGAGGAATGTCTTTTAGAGGGCCCGCTGTGATTCCAAGTTCTGTTCCTGATTTGCACCCAGGTGCAGATTCTCGAAGAATGACATCTGCTCTGAATGGTTATGGCAATTCATCAGAGCGTACTCTGTATAGCAGTAGAGAAGATCAAATGACAAGACATGGACCAGATAGATTTGCTGGTCCAACTGCTTATGACCAATCAGCTGTTCAGGAGCGTAATATTAATTATGGTAATAGGGAGTCGAGAAATGCAGACCGGAGTCAAGAGAGACCAGTTGCAACTTTAACTCCTGGAGTTCAAGGATCTGCTGTCTCTGAGAATGTGTCGTTGGAGAAGGTTTTGCCAGCAGAACGATTGCAGGACATGTCCATGGCGGCAATTAAAGAATACTACAGTGCTAGAGATGTAAAAGAAGTTGCGCAGTGTGTCAAAGATTTAAAGTCTCCCAGCTATCATCCTTCGATGATTTCTTTATGGGTCACGGACTCCTTTGAGAGAAAGGACACGGAAAGAGATCTTTTGGCCAAATTACTAGTGAGCCTTACAAAGTCTCAGGATGCCACCTTGAGTCAGACTCAGCTTATCCAAGGGTTTGAATATGTTCTAAATGGTCTGGAAGATGCCGTCAATGATGCCCCCAAAGCGCCAGAATTTCTAGGCCGACTTTTTGCCAGAGTTGTGACAGAAAATGTTGTCTCTTTGAAAGAGATCGGCCAACTATTATCACGTGAAGGCGGAGAGGAGCAAGGCCAGCTCTTAGAAATTCAACTCGCAGCCGATGTTCTTGGAAGCACATTGGAAGCAATAAAAGTGGAGAAGGGAGACGCTGTCTTGAGTGAGATTCGGTCAAACTCTAACTTGAGGCTGGAGACTTTCCGGCCACCCCATCCCATTATATCAAGGAAGTTGGAAAGTTTTATTTAG 5502 0.4429 MSVNQSRSDKSDNHYRKSGRSGSFHQQRGSSGTYVKGGGGGPAPSPGITSGSSQPSNRSFKRSNNPHGGQSRVNPPPVNSAESNSASTGRTIPNGAHLQQSPGASDAPGTNAAAKSSEASSVQKSFRVVPKAPAPRPTTINSDTAAPTTPTKVPGDSSKPFAFQFGSISPGFMNGISVPARTSSAPPNLDEQKRGQARHDSFRSAPSAPTPPQQLPPRNDGGVTDQCNAGEAHSVNKVKKEEQASALPPSSQVQKPSVAMTGISTAMPYHHQSQAPVQFGGPNPQILSQGMSAASLQMPIPMHLPMGNVAQVQQQVFVPGLQPLPIHPQGIMHQGQNLSFSSQMSPQLPHQLGSMGINLNPQYPMQQGGKFAGPRKTTTVKITHPETHEELRLDFEKKEDSHSDGTSSSVRSYPSIPSQPQPVQSFATSHPLNYYPSSTYSSSSLYFPPTSVPLPSSHITPNSQQPRFNYPVNPGPQNAGFNNQLSIGSFPVNKTGASVHGLGETPNLEHSRGVQKGISSTISGLTHAGIKPSGTSGVKASESPSSLGASIDVGLTQKGSDNCSETLLHQSKSSSDSFVARSLPKQPAAGPAEKLASTPLMPSPASLSDNSASDLSNNEGRRNESLSRSNSMKDNQKKTGRRGESSHQVPVLSPAVVVVPSQSVDSAMPDREISDTVGNKTKPCAAITTEDISSTPEALSVTANSGIVPDANEMNIDPSAENFVCIPAEGVGASAVDGLENHEHEKLEESSQQDKPEKMDVFEMGNKNDGSEVFKQKGDGDGMKFEERKHGAAKELQDVQQRPELQDESTDCRSACEMTSDSLGVSTADDLDSRDISLNRNDSTVSNESISTTSATSDNKDCSENAESGSVSLPTSFNKDRPILEPNKVKTIAKGKKKRKETLQKADAAGSTSDLYNAYKRPEEKKEVVSTESKEITSPGRLKQLPNEAAQSDAIATVKDGHDNAEPDDWEDAADMSSPKLEVVGTTQQVSDGSELTAKKYSRDFLLKFEEQYVDLPEGFEITADIAEALMNSNITGSHVERDSHLSPGRIMDRSGGMSRMDRHGSGRFEEDRWGKIPGPFNSGRDTRMDGFGGNAGFRPGQGGNFGVLRNPRVQAPLQYAGGILSGPMQSMGNQGVTQKNSPDGERWQRATNFQQRGLIPSPQTPLQVMHKAERKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNTDTLNGVISQIFEKALMEPTFCEMYANFCLHLAAVLPDFGEDNEKITFKRLLLNKCQEEFERGEREQEEANKNDEGEVKQSAEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGSYEDPDEEDIEALCKLMSTIGEIIDHPKAKEHMDAYFERMILLSKNMNLSSRVRFMLKDAIDLRKNRWQQKRKVEGPKKIEEVHRDAAQERQAQTGRLGRGPGNAASSRRMPMDFSPRGSSMFSPTNNPMGLRAPQVRGGGSQDVRQDNRLSYEARNLSVTLPQRPLGDDSITLGPQGGLARGMSFRGPAVIPSSVPDLHPGADSRRMTSALNGYGNSSERTLYSSREDQMTRHGPDRFAGPTAYDQSAVQERNINYGNRESRNADRSQERPVATLTPGVQGSAVSENVSLEKVLPAERLQDMSMAAIKEYYSARDVKEVAQCVKDLKSPSYHPSMISLWVTDSFERKDTERDLLAKLLVSLTKSQDATLSQTQLIQGFEYVLNGLEDAVNDAPKAPEFLGRLFARVVTENVVSLKEIGQLLSREGGEEQGQLLEIQLAADVLGSTLEAIKVEKGDAVLSEIRSNSNLRLETFRPPHPIISRKLESFI 1833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2985g00008 1833 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 356 1832 IPR045208 GO:0003743
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 406 429 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 1555 1570 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 137 155 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 744 949 - -
Pral2985g00008 1833 Gene3D - 1638 1833 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 1281 1306 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 601 633 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 812 827 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 744 811 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 46 124 - -
Pral2985g00008 1833 Pfam MA3 domain 1651 1757 IPR003891 -
Pral2985g00008 1833 FunFam Eukaryotic translation initiation factor 4G 1190 1425 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 176 190 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 524 581 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 1428 1489 - -
Pral2985g00008 1833 SMART ma3_7 1645 1759 IPR003891 -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 1540 1591 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 385 405 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 524 656 - -
Pral2985g00008 1833 Gene3D - 1190 1425 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 918 932 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 838 877 - -
Pral2985g00008 1833 FunFam Eukaryotic translation initiation factor 4G 1638 1832 - -
Pral2985g00008 1833 Pfam MIF4G domain 1190 1411 IPR003890 GO:0003723|GO:0005515
Pral2985g00008 1833 Coils Coil 1272 1304 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 385 429 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 1056 1075 - -
Pral2985g00008 1833 ProSiteProfiles MI domain profile. 1644 1768 IPR003891 -
Pral2985g00008 1833 SMART if4_15 1190 1412 IPR003890 GO:0003723|GO:0005515
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 1 257 - -
Pral2985g00008 1833 MobiDBLite consensus disorder prediction 1040 1085 - -
Pral2985g00008 1833 SUPERFAMILY ARM repeat 1184 1414 IPR016024 -
Pral2985g00008 1833 SUPERFAMILY ARM repeat 1640 1829 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2985g00008 Pral-Chr2985 31929 40479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2985g00008 1 1832 Eukaryotic Initiation Factors Gene Family AT3G60240 44.848 0.0 1266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2985g00008 K03260 - gmx:100796636 2144.39