Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2981g00002 ATGGGGAAATCAGCGTTTCATGATTCTCTAAAAGCTCTGGAAGCTGATATTCAGTACGCCAATGATCTGTTATTAGGGTATCCGAGAGATAAAGATGGAGCATGCTTTCAAATGAGACTGTCATACGGTCCAGGTGCTACCTTATTTCTTTTTCTTGTTCAATGGGCGGATTACCACCTGGCTGGTGCTCTGGGTTTACTGAGAGTTCTAGTTTATATGACCTATGGAGATGGGAAGACCACCATGTCAATATATGAAAGGAAAGCAAGCATTAAAGAGTTTAACTCGGTTATATTTCCTGCTTTGTTGCAACTTGAGAAGGGCATCACAGATTTGGAGGAAAAGAAACAAAATGAAGTATATGCTATTAGATATAAGAAGAAAGAAAAACAATCAAAATTTGACGTGGAAAGAGAAGAGGAGTGTGGAATTTGCATGGAGGTGAAGGCAAAAGTTGTGCTGCCTAATTGCTGCCATTGCATGTGTTTGAAGTGCTTCAGGGATTGGTGTGAGAAATCCGAGTCATGCCCCTTTTGCCGGGGAAATCTTAAAAGGGTCAATTCATGTGACCTTTGGAATTACATAGATGAGGGTGATATTATGGATATCAGAGCGATTTTCAAAGAGAACCTTAAGAGGTTGCTTTGGTACATGGAGAAGTTGCCTATTGTTGATCCGGACCCCACGCATGTCTCTTATGAACCCTGTAGGAGTTAA 717 0.41 MGKSAFHDSLKALEADIQYANDLLLGYPRDKDGACFQMRLSYGPGATLFLFLVQWADYHLAGALGLLRVLVYMTYGDGKTTMSIYERKASIKEFNSVIFPALLQLEKGITDLEEKKQNEVYAIRYKKKEKQSKFDVEREEECGICMEVKAKVVLPNCCHCMCLKCFRDWCEKSESCPFCRGNLKRVNSCDLWNYIDEGDIMDIRAIFKENLKRLLWYMEKLPIVDPDPTHVSYEPCRS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2981g00002 238 PANTHER RING FINGER PROTEIN 41, 151 4 228 - -
Pral2981g00002 238 ProSiteProfiles Zinc finger RING-type profile. 142 180 IPR001841 -
Pral2981g00002 238 SUPERFAMILY RING/U-box 130 185 - -
Pral2981g00002 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 192 IPR013083 -
Pral2981g00002 238 FunFam RING/U-box superfamily protein 123 189 - -
Pral2981g00002 238 Pfam Ring finger domain 141 180 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2981g00002 Pral-Chr2981 4588 7364 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2981g00002 82 183 C3H Transcription Factor Family AT1G04360 24.107 1.72e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2981g00002 - K25840 gmx:100808567 370.933