Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2978g00009 ATGAGAAGCATTTCTCAATTTCCCTATAAAACTCTCCTTTTCATTAGCTTTCTGATCTGTACATATTATAAACTTGAAAAAAAAAAAAAAAAAGATGATATGGAAGACTCTGGCGTGTTCAGGTTCGACATTAGCGGTGCTTTCCTTGATGAGACAACACAAACTTTCAACACAGCATATTGTGGTAATCAGACTGAAGATGACGATGGAGCCACAAGATTCACATCAGTTGCACAACAGTTGCTGATGAATCTTCAAACAGTAACACCAAATATCAGAGGATCTTCTGCAGCCATGAAGATGACAGTGTCTAACGTTGGTCCAACTATTTATGCCTTTGCCCAATGTATTGAAACCATATCACAAAATGAGTGCCTCAGTTGCTTGAATGCTGGATACAACAATATAAAGACTTGTCTTTCCTACTCAGATGGTAGGGCTTTTGCCGATGGGTGTTTCATGAGATACTCCACAACTTCCTTTTTTCCTGATAACCAGACTATTGATATCGTACCTGCCTTCAAACAAGGTTCAAGTAACAAGGGGGCCATTGCTGCTGGAGTTGTTTCAGGTGCTGCTCTTGCTTTGCTCCTCGTTGCATTATTTGCTTGGATGAGACGAACTAAAAGCCCAAAGAGGGTTCCTAGAGGAGAGATACCTGGAGCGAGTAAGTTGAAAGGCTCAATAACTTTTAGTTATAAGGATTTAAAGTCTGCAACTAAGAATTTTAGTGACGAAAATAAAATAGGAGAAGGTGGATTTGGTGTTGTATACAAGGGCATTTTGGGGAATGGGAAAGTAGTTGCAGTAAAGAAATTAGCTTTACGAGCCTCCAATAGGATCGATGAAGATTTTGAGAGTGAAGTGATGCTGATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTTTGGGATCTTGTAGCAAAGGTCACGATAGAATCCTTGTTTACGAATACATGAAAAACAACAGTCTTGACAGATTCTTATTTGGTGAAAGGAAAGGTTCTCTCAATTGGAAGCAACGATATGAAGTGATTTTAGGAATAGCAAGAGGCTTGACTTATCTTCATGAGGAATTTCATATTCGCATTATTCATAGAGATATAAAGACAAATAACATTCTGTTAGATGATGATCTACAACCACGAATTGCTGATTTTGGGTTGGCAAGGCTTATACCTGAGAATAGAACTCATCTTAGTACAAAATTTGCAGGAACATTAGGATACACTGCACCAGAGTATGCAATTCATGGACAACTATCTGAAAAGGCTGATATTTATAGTTATGGTATTGTTGTCTTAGAAATCATTAGCGGCCAAAAAAGCAATGAATTGAAAGTTGATGGTGATGCTGAAGGCGAATTCCTCCTCCAAAAAGCTTGGAAACTTTATGAGAGAGGCATGCATTTAGAGTTGGTGGACAATGCCTTAGACAGTAATGATTATGATGCAGAAGAAGTGAAGAAAATTATAGAAATTGGTTTGCTATGCACTCAAGCATCTGCAGAAATAAGACCGGCAATATCTGAAATAGTGGTTTTGCTTCAGAACAAGGGTTTATTAGAGAATATGAGGCCGACTATGCCTATCTTGATTGAACCTAATTAG 1611 0.3805 MRSISQFPYKTLLFISFLICTYYKLEKKKKKDDMEDSGVFRFDISGAFLDETTQTFNTAYCGNQTEDDDGATRFTSVAQQLLMNLQTVTPNIRGSSAAMKMTVSNVGPTIYAFAQCIETISQNECLSCLNAGYNNIKTCLSYSDGRAFADGCFMRYSTTSFFPDNQTIDIVPAFKQGSSNKGAIAAGVVSGAALALLLVALFAWMRRTKSPKRVPRGEIPGASKLKGSITFSYKDLKSATKNFSDENKIGEGGFGVVYKGILGNGKVVAVKKLALRASNRIDEDFESEVMLISNVHHRNLVRLLGSCSKGHDRILVYEYMKNNSLDRFLFGERKGSLNWKQRYEVILGIARGLTYLHEEFHIRIIHRDIKTNNILLDDDLQPRIADFGLARLIPENRTHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGIVVLEIISGQKSNELKVDGDAEGEFLLQKAWKLYERGMHLELVDNALDSNDYDAEEVKKIIEIGLLCTQASAEIRPAISEIVVLLQNKGLLENMRPTMPILIEPN 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2978g00009 536 SMART serkin_6 243 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2978g00009 536 Gene3D Transferase(Phosphotransferase) domain 1 320 525 - -
Pral2978g00009 536 FunFam Cysteine-rich receptor-like protein kinase 2 209 319 - -
Pral2978g00009 536 ProSiteProfiles Gnk2-homologous domain profile. 55 161 IPR002902 -
Pral2978g00009 536 Pfam Salt stress response/antifungal 61 158 IPR002902 -
Pral2978g00009 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
Pral2978g00009 536 Gene3D Phosphorylase Kinase; domain 1 210 319 - -
Pral2978g00009 536 ProSiteProfiles Protein kinase domain profile. 243 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2978g00009 536 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 41 534 - -
Pral2978g00009 536 FunFam Cysteine-rich receptor-like protein kinase 2 320 524 - -
Pral2978g00009 536 Gene3D - 53 161 IPR038408 -
Pral2978g00009 536 Pfam Protein kinase domain 244 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2978g00009 536 SUPERFAMILY Protein kinase-like (PK-like) 226 516 IPR011009 -
Pral2978g00009 536 CDD STKc_IRAK 249 518 - -
Pral2978g00009 536 FunFam Cysteine-rich receptor-like protein kinase 2 56 161 - -
Pral2978g00009 536 ProSitePatterns Protein kinases ATP-binding region signature. 249 272 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2978g00009 Pral-Chr2978 56532 59836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2978g00009 41 534 Receptor kinase-like Gene Family AT1G70520 37.187 5.01e-106 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2978g00009 Pkinase 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2978g00009 - - gmx:100813585 640.573