Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2978g00008 ATGAGAAGCATTTCTCAATTTCCCTATAAAACTCTCCTTTTCATTAGCTTTCTGATCTGTACATATTATAAACTTGAAAAAAAAAAAAAAAAAGATGATATGGAAGACTCTGGCGTGTTCAGGTTCGACATTAGCGGTGCTTTCCTTGATGAGACAACACAAACTTTCAACACAGCATATTGTGGTAATCAGACTGAAGATGACGATGGAGCCACAAGATTCACATCAGTTGCACAACAGTTGCTGATGAATCTTCAAACAGTAACACCAAATATCAGAGGATCTTCTGCAGCCATGAAGATGACAGTGTCTAACGTTGGTCCAACTATTTATGCCTTTGCCCAATGTATTGAAACCATATCACAAAATGAGTGCCTCAGTTGCTTGAATGCTGGATACAACAATATAAAGACTTGTCTTTCCTACTCAGATGGTAGGGCTTTTGCCGATGGGTGTTTCATGAGATACTCCACAACTTCCTTTTTTCCTGATAACCAGACTATTGATATCGTACCTGCCTTCAAACAAGGTTCAAGTAACAAGGGGGCCATTGCTGCTGGAGTTGTTTCAGGTGCTGCTCTTGCTTTGCTCCTCGTTGCATTATTTGCTTGGATGAGACGAACTAAAAGCCCAAAGAGGGTTCCTAGAGGTGAAAGGAAAGGTTCTCTCAATTGGAAGCAACGATATGAAGTGATTTTAGGAATAGCAAGAGGCTTGACTTATCTTCATGAGGAATTTCATATTCGCATTATTCATAGAGATATAAAGACAAATAACATTCTGTTAGATGATGATCTACAACCACGAATTGCTGATTTTGGGTTGGCAAGGCTTATACCTGAGAATAGAACTCATCTTAGTACAAAATTTGCAGGAACATTAGGATACACTGCACCAGAGTATGCAATTCATGGACAACTATCTGAAAAGGCTGATATTTATAGTTATGGTATTGTTGTCTTAGAAATCATTAGCGGCCAAAAAAGCAATGAATTGAAAGTTGATGGTGATGCTGAAGGCGAATTCCTCCTCCAAAAAGCTTGGAAACTTTATGAGAGAGGCATGCATTTAGAGTTGGTGGACAATGCCTTAGACAGTAATGATTATGATGCAGAAGAAGTGAAGAAAATTATAGAAATTGGTTTGCTATGCACTCAAGCATCTGCAGAAATAAGACCGGCAATATCTGAAATAGTGGTTTTGCTTCAGAACAAGGGTTTATTAGAGAATATGAGGCCGACTATGCCTATCTTGATTGAACCTAATTAG 1269 0.3853 MRSISQFPYKTLLFISFLICTYYKLEKKKKKDDMEDSGVFRFDISGAFLDETTQTFNTAYCGNQTEDDDGATRFTSVAQQLLMNLQTVTPNIRGSSAAMKMTVSNVGPTIYAFAQCIETISQNECLSCLNAGYNNIKTCLSYSDGRAFADGCFMRYSTTSFFPDNQTIDIVPAFKQGSSNKGAIAAGVVSGAALALLLVALFAWMRRTKSPKRVPRGERKGSLNWKQRYEVILGIARGLTYLHEEFHIRIIHRDIKTNNILLDDDLQPRIADFGLARLIPENRTHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGIVVLEIISGQKSNELKVDGDAEGEFLLQKAWKLYERGMHLELVDNALDSNDYDAEEVKKIIEIGLLCTQASAEIRPAISEIVVLLQNKGLLENMRPTMPILIEPN 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2978g00008 422 Gene3D Transferase(Phosphotransferase) domain 1 203 411 - -
Pral2978g00008 422 Gene3D - 53 161 IPR038408 -
Pral2978g00008 422 SMART serkin_6 111 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2978g00008 422 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 221 420 - -
Pral2978g00008 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Pral2978g00008 422 ProSiteProfiles Gnk2-homologous domain profile. 55 161 IPR002902 -
Pral2978g00008 422 Pfam Protein kinase domain 219 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2978g00008 422 FunFam Cysteine-rich receptor-like protein kinase 2 208 410 - -
Pral2978g00008 422 Pfam Salt stress response/antifungal 61 158 IPR002902 -
Pral2978g00008 422 ProSiteProfiles Protein kinase domain profile. 63 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2978g00008 422 SUPERFAMILY Protein kinase-like (PK-like) 220 402 IPR011009 -
Pral2978g00008 422 FunFam Cysteine-rich receptor-like protein kinase 2 56 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2978g00008 Pral-Chr2978 56532 59837 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2978g00008 217 403 Receptor kinase-like Gene Family AT1G56120 50.000 1.93e-60 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2978g00008 Pkinase 6.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2978g00008 - - sita:101785519 355.525