Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2978g00007 ATGAGAAGCATTTCTCAATTTCCCTATAAAACTCTCCTTTTCATTAGCTTTCTGATCTGTACATATTATAAACTTGAAAAAAAAAAAAAAAAAGATGATATGGAAGACTCTGGCGTGTTCAGGTTCGACATTAGCGGTGCTTTCCTTGATGAGACAACACAAACTTTCAACACAGCATATTGTGGTAATCAGACTGAAGATGACGATGGAGCCACAAGATTCACATCAGTTGCACAACAGTTGCTGATGAATCTTCAAACAGTAACACCAAATATCAGAGGATCTTCTGCAGCCATGAAGATGACAGTGTCTAACGTTGGTCCAACTATTTATGCCTTTGCCCAATGTATTGAAACCATATCACAAAATGAGTGCCTCAGTTGCTTGAATGCTGGATACAACAATATAAAGACTTGTCTTTCCTACTCAGATGGTAGGGCTTTTGCCGATGGGTGTTTCATGAGATACTCCACAACTTCCTTTTTTCCTGATAACCAGACTATTGATATCGTACCTGCCTTCAAACAAGGTGCTGCTCTTGCTTTGCTCCTCGTTGCATTATTTGCTTGGATGAGACGAACTAAAAGCCCAAAGAGGGTTCCTAGAGGAGAGATACCTGGAGCGAGTAAGTTGAAAGGCTCAATAACTTTTAGTTATAAGGATTTAAAGTCTGCAACTAAGAATTTTAGTGACGAAAATAAAATAGGAGAAGGTGGATTTGGTGTTGTATACAAGGGCATTTTGGGGAATGGGAAAGTAGTTGCAGTAAAGAAATTAGCTTTACGAGCCTCCAATAGGATCGATGAAGATTTTGAGAGTGAAGTGATGCTGATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTTTGGGATCTTGTAGCAAAGGTCACGATAGAATCCTTGTTTACGAATACATGAAAAACAACAGTCTTGACAGATTCTTATTTGGTGAAAGGAAAGGTTCTCTCAATTGGAAGCAACGATATGAAGTGATTTTAGGAATAGCAAGAGGCTTGACTTATCTTCATGAGGAATTTCATATTCGCATTATTCATAGAGATATAAAGACAAATAACATTCTGTTAGATGATGATCTACAACCACGAATTGCTGATTTTGGGTTGGCAAGGCTTATACCTGAGAATAGAACTCATCTTAGTACAAAATTTGCAGGAACATTAGGATACACTGCACCAGAGTATGCAATTCATGGACAACTATCTGAAAAGGCTGATATTTATAGTTATGGTATTGTTGTCTTAGAAATCATTAGCGGCCAAAAAAGCAATGAATTGAAAGTTGATGGTGATGCTGAAGGCGAATTCCTCCTCCAAAAAGCTTGGAAACTTTATGAGAGAGGCATGCATTTAGAGTTGGTGGACAATGCCTTAGACAGTAATGATTATGATGCAGAAGAAGTGAAGAAAATTATAGAAATTGGTTTGCTATGCACTCAAGCATCTGCAGAAATAAGACCGGCAATATCTGAAATAGTGGTTTTGCTTCAGAACAAGGGTTTATTAGAGAATATGAGGCCGACTATGCCTATCTTGATTGAACCTAATTAG 1569 0.3773 MRSISQFPYKTLLFISFLICTYYKLEKKKKKDDMEDSGVFRFDISGAFLDETTQTFNTAYCGNQTEDDDGATRFTSVAQQLLMNLQTVTPNIRGSSAAMKMTVSNVGPTIYAFAQCIETISQNECLSCLNAGYNNIKTCLSYSDGRAFADGCFMRYSTTSFFPDNQTIDIVPAFKQGAALALLLVALFAWMRRTKSPKRVPRGEIPGASKLKGSITFSYKDLKSATKNFSDENKIGEGGFGVVYKGILGNGKVVAVKKLALRASNRIDEDFESEVMLISNVHHRNLVRLLGSCSKGHDRILVYEYMKNNSLDRFLFGERKGSLNWKQRYEVILGIARGLTYLHEEFHIRIIHRDIKTNNILLDDDLQPRIADFGLARLIPENRTHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGIVVLEIISGQKSNELKVDGDAEGEFLLQKAWKLYERGMHLELVDNALDSNDYDAEEVKKIIEIGLLCTQASAEIRPAISEIVVLLQNKGLLENMRPTMPILIEPN 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2978g00007 522 CDD STKc_IRAK 235 504 - -
Pral2978g00007 522 Gene3D Phosphorylase Kinase; domain 1 196 305 - -
Pral2978g00007 522 FunFam Cysteine-rich receptor-like protein kinase 2 56 161 - -
Pral2978g00007 522 ProSitePatterns Protein kinases ATP-binding region signature. 235 258 IPR017441 GO:0005524
Pral2978g00007 522 Pfam Protein kinase domain 230 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2978g00007 522 Pfam Salt stress response/antifungal 61 158 IPR002902 -
Pral2978g00007 522 Gene3D Transferase(Phosphotransferase) domain 1 306 511 - -
Pral2978g00007 522 ProSiteProfiles Gnk2-homologous domain profile. 55 161 IPR002902 -
Pral2978g00007 522 Gene3D - 53 161 IPR038408 -
Pral2978g00007 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Pral2978g00007 522 SUPERFAMILY Protein kinase-like (PK-like) 212 502 IPR011009 -
Pral2978g00007 522 SMART serkin_6 229 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2978g00007 522 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 41 520 - -
Pral2978g00007 522 FunFam Cysteine-rich receptor-like protein kinase 2 195 305 - -
Pral2978g00007 522 ProSiteProfiles Protein kinase domain profile. 229 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2978g00007 522 FunFam Cysteine-rich receptor-like protein kinase 2 306 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2978g00007 Pral-Chr2978 56532 59837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2978g00007 41 520 Receptor kinase-like Gene Family AT1G70520 37.965 2.65e-107 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2978g00007 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2978g00007 - - gmx:100813585 635.18