Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2978g00005 ATGAGAAGCATTTCTCAATTTCCCTATAAAACTCTCCTTTTCATTAGCTTTCTGATCTGTACATATTATAAACTTGAAAAAAAAAAAAAAAAAGATGATATGGAAGACTCTGGCGTGTTCAGGTTCGACATTAGCGGTGCTTTCCTTGATGAGACAACACAAACTTTCAACACAGCATATTGTGGTAATCAGACTGAAGATGACGATGGAGCCACAAGATTCACATCAGTTGCACAACAGTTGCTGATGAATCTTCAAACAGTAACACCAAATATCAGAGGATCTTCTGCAGCCATGAAGATGACAGTGTCTAACGTTGGTCCAACTATTTATGCCTTTGCCCAATATGGTAGGGCTTTTGCCGATGGGTGTTTCATGAGATACTCCACAACTTCCTTTTTTCCTGATAACCAGACTATTGATATCGTACCTGCCTTCAAACAAGGTTCAAGTAACAAGGGGGCCATTGCTGCTGGAGTTGTTTCAGGTGCTGCTCTTGCTTTGCTCCTCGTTGCATTATTTGCTTGGATGAGACGAACTAAAAGCCCAAAGAGGGTTCCTAGAGGAGAGATACCTGGAGCGAGTAAGTTGAAAGGCTCAATAACTTTTAGTTATAAGGATTTAAAGTCTGCAACTAAGAATTTTAGTGACGAAAATAAAATAGGAGAAGGTGGATTTGGTGTTGTATACAAGGGCATTTTGGGGAATGGGAAAGTAGTTGCAGTAAAGAAATTAGCTTTACGAGCCTCCAATAGGATCGATGAAGATTTTGAGAGTGAAGTGATGCTGATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTTTGGGATCTTGTAGCAAAGGTCACGATAGAATCCTTGTTTACGAATACATGAAAAACAACAGTCTTGACAGATTCTTATTTGGTGAAAGGAAAGGTTCTCTCAATTGGAAGCAACGATATGAAGTGATTTTAGGAATAGCAAGAGGCTTGACTTATCTTCATGAGGAATTTCATATTCGCATTATTCATAGAGATATAAAGACAAATAACATTCTGTTAGATGATGATCTACAACCACGAATTGCTGATTTTGGGTTGGCAAGGCTTATACCTGAGAATAGAACTCATCTTAGTACAAAATTTGCAGGAACATTAGGATACACTGCACCAGAGTATGCAATTCATGGACAACTATCTGAAAAGGCTGATATTTATAGTTATGGTATTGTTGTCTTAGAAATCATTAGCGGCCAAAAAAGCAATGAATTGAAAGTTGATGGTGATGCTGAAGGCGAATTCCTCCTCCAAAAAGCTTGGAAACTTTATGAGAGAGGCATGCATTTAGAGTTGGTGGACAATGCCTTAGACAGTAATGATTATGATGCAGAAGAAGTGAAGAAAATTATAGAAATTGGTTTGCTATGCACTCAAGCATCTGCAGAAATAAGACCGGCAATATCTGAAATAGTGGTTTTGCTTCAGAACAAGGGTTTATTAGAGAATATGAGGCCGACTATGCCTATCTTGATTGAACCTAATTAG 1527 0.3811 MRSISQFPYKTLLFISFLICTYYKLEKKKKKDDMEDSGVFRFDISGAFLDETTQTFNTAYCGNQTEDDDGATRFTSVAQQLLMNLQTVTPNIRGSSAAMKMTVSNVGPTIYAFAQYGRAFADGCFMRYSTTSFFPDNQTIDIVPAFKQGSSNKGAIAAGVVSGAALALLLVALFAWMRRTKSPKRVPRGEIPGASKLKGSITFSYKDLKSATKNFSDENKIGEGGFGVVYKGILGNGKVVAVKKLALRASNRIDEDFESEVMLISNVHHRNLVRLLGSCSKGHDRILVYEYMKNNSLDRFLFGERKGSLNWKQRYEVILGIARGLTYLHEEFHIRIIHRDIKTNNILLDDDLQPRIADFGLARLIPENRTHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGIVVLEIISGQKSNELKVDGDAEGEFLLQKAWKLYERGMHLELVDNALDSNDYDAEEVKKIIEIGLLCTQASAEIRPAISEIVVLLQNKGLLENMRPTMPILIEPN 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2978g00005 508 ProSitePatterns Protein kinases ATP-binding region signature. 221 244 IPR017441 GO:0005524
Pral2978g00005 508 SMART serkin_6 215 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2978g00005 508 ProSiteProfiles Protein kinase domain profile. 215 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2978g00005 508 Pfam Protein kinase domain 216 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2978g00005 508 SUPERFAMILY Protein kinase-like (PK-like) 198 488 IPR011009 -
Pral2978g00005 508 CDD STKc_IRAK 221 490 - -
Pral2978g00005 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 336 348 IPR008271 GO:0004672|GO:0006468
Pral2978g00005 508 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 84 506 - -
Pral2978g00005 508 FunFam Cysteine-rich receptor-like protein kinase 2 292 496 - -
Pral2978g00005 508 Gene3D Transferase(Phosphotransferase) domain 1 292 497 - -
Pral2978g00005 508 Gene3D Phosphorylase Kinase; domain 1 182 291 - -
Pral2978g00005 508 FunFam Cysteine-rich receptor-like protein kinase 2 181 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2978g00005 Pral-Chr2978 56532 59838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2978g00005 139 489 Receptor kinase-like Gene Family AT1G56120 45.098 1.88e-99 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2978g00005 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2978g00005 - - gmx:100813585 590.112