Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2976g00003 ATGGGCCCTTGTGCTGCACCATATCAAAGACTGGGGTCGCCCGATCTCAAACCGCTTCCGCCATTGCCGCCCCACAGAAACAGAGGGACTGGCGAAGATGAGGAAGAAGAGGAGTTCTTCTCTCCAAGAAGGTCTTCAGGCCGCAGACTGAGTCCAGTGCGTACTGGGTCAGGGAGAGTGCTCCGGTTGGGAATGGATAGACTTGGGATTGGGAGTAGAAGCTTCAATTCAACAACACCCCGCGCTTGCTCAAATTCTGCATCGGCCACTTCTTCCCCTTGTTTGAATTTTAGTCCCAGGCACTCTTCGGAGCCTCAGCCCCCGATGAGATCCTCCTCACCGTCTTCACCGGAGGTTAATTGGAATTTTCTAGTGTCAGAACAGAGGAAGAATTCTGAGGCCAGAAATGAGATAAATGTTCCAATCGAGAAGCCCCCATCTCCCCCGCCACTTCCGCCTCCACGCTTTTGGGAACGATCTCCAAATAACAATGAGGATACTCGAAAGCCAAGGTTGAAACCTTTGCACTGGGATAAGGTTAGGGCCTGCTCGGATCGGGCCATGGTTTGGGATCAGTTAAAACCGGGTTCTTTCCAATTGAACGAGGAAATGATAGAGACGCTTTTTATGGTGAATAATACCGCAAATTTCGCTATCAGAGATAATGCTCGGCGTCAAATTGTTGCTTCTCCCCCCTTGGAATACAAGGTACTTGACCCTAAGAAGTCTCACAACATCGCCATTTTGCTCAGGGCACTCAATGTGACTATGGATGAAGTATGCGAGGCCCTCAAAGAAGGCAATTGGGATATGCTGGGAACAGAACTTTTAGAAAGTTTGTTAAAGATGGCTCCAACCAAAGATGAAGAATGTAAGCTGAAGGAGTTCAAAGATGAATCAGCCTTCAAGCTTGGTCCAGCTGAGAAATTTCTTAAAATCGTTCTTGATATTCCTTTTGCATTTAAGAGAGTTGACGCAATGCTTTACATTGCTAACTTTGATTCAGAATCAGAATACCTTAGGAAGTCCTTTGAGACTTTGGAGGTGGCCTGTGAGGAACTAAGGAATAACAGATTGTTTTTGAAGCTCCTTGAAGCCGTGCTGAGAACTGGAAATCGTATGAATGTTGGCACGAATCGTGGTGATGCGCATGCATTCAAGCTGGACACGCTTCTGAAGCTAGTTGATATTAAAGGGGCTGATGGAAAGACTACTCTGTTGCATTTTGTTGTGCAGGAAATGGTCAGAACTGAAGGTTCTCGAATATCCTGTGCTACTGATCATCACCAAACTGCTGAAAAGATCCAGCAGTCTACATTCCAGGATGAAGTTGAATTTAGGAAACTTGGACTCCAAGTTGTTTCAGGTCTGAGTGGGGAGCTCAGCAATGTACAAAAAGCAGCTACAATGGATTCAGAGATGCTTAGCGATGATGTCTCCAAGCTTGCCAGAGGGATTGCAGAAGTTGCAGAAGTTGAAAAATTGAATGGAGAATCACCATTGAGAGAGAATAGTGAAAAATTTTCGGAGGCAATGAAACGTTTCTTGAAGAAGGGAGAGAAGGAAATTGTTTTGATTCAGGCACAAGAGAAGAATGCTCTCTCTTCAGTGAAGAAGCTAACGGAGTATTTCCATGGAAATTCTTCCAAGGAAGAAGCTCATCCGTTTAGGATTTTTATGATCGTGAGGGATTTCCTTTCAATACTTGATCGTGTGTGCAAGGAAGTTGGGAAAATAAACGACAGAACTTTGGTTGGTTTCCGTCAATACTCAGAGCCTTCAAATCCCATCCTGCTACCAATGTTCCATGAGATTGTTGGTTCCTTGGATGATGAAACCTCCTCTCGCTCATCATAG 1857 0.4523 MGPCAAPYQRLGSPDLKPLPPLPPHRNRGTGEDEEEEEFFSPRRSSGRRLSPVRTGSGRVLRLGMDRLGIGSRSFNSTTPRACSNSASATSSPCLNFSPRHSSEPQPPMRSSSPSSPEVNWNFLVSEQRKNSEARNEINVPIEKPPSPPPLPPPRFWERSPNNNEDTRKPRLKPLHWDKVRACSDRAMVWDQLKPGSFQLNEEMIETLFMVNNTANFAIRDNARRQIVASPPLEYKVLDPKKSHNIAILLRALNVTMDEVCEALKEGNWDMLGTELLESLLKMAPTKDEECKLKEFKDESAFKLGPAEKFLKIVLDIPFAFKRVDAMLYIANFDSESEYLRKSFETLEVACEELRNNRLFLKLLEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGADGKTTLLHFVVQEMVRTEGSRISCATDHHQTAEKIQQSTFQDEVEFRKLGLQVVSGLSGELSNVQKAATMDSEMLSDDVSKLARGIAEVAEVEKLNGESPLRENSEKFSEAMKRFLKKGEKEIVLIQAQEKNALSSVKKLTEYFHGNSSKEEAHPFRIFMIVRDFLSILDRVCKEVGKINDRTLVGFRQYSEPSNPILLPMFHEIVGSLDDETSSRSS 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2976g00003 618 SMART it6_source 162 584 IPR015425 -
Pral2976g00003 618 MobiDBLite consensus disorder prediction 1 170 - -
Pral2976g00003 618 MobiDBLite consensus disorder prediction 71 129 - -
Pral2976g00003 618 SUPERFAMILY Formin homology 2 domain (FH2 domain) 145 580 - -
Pral2976g00003 618 MobiDBLite consensus disorder prediction 142 157 - -
Pral2976g00003 618 Pfam Formin Homology 2 Domain 164 569 IPR015425 -
Pral2976g00003 618 Gene3D Formin, FH2 domain 158 579 IPR042201 -
Pral2976g00003 618 PANTHER FORMIN-RELATED 10 602 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pral2976g00003 618 ProSiteProfiles Formin homology-2 (FH2) domain profile. 162 595 IPR015425 -
Pral2976g00003 618 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2976g00003 Pral-Chr2976 25080 28726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2976g00003 13 615 FH2 protein (formin) Gene Family AT2G43800 52.488 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2976g00003 - - vun:114175163 704.516