Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2974g00003 ATGAGAATTACAGAAGAGAACAGTAAAGGTAACAGGAAGAAACGGAAGAAGGGAAAAGATAATGATGAAATAATCAATGGTATCATTGATCGTGATAATGAAATGCAGTTCTTAGATGACAAGCAAGAAAGGAAAACAAAGAAAAGAAAACATTGCAATGATTCCATCCCTGAAATGCAAGAAGTTTTTGCTTTGAAATTGAGAGGTGAAAACAATGGAACAGAGGCTATTGGGTTGAAAAGCAATGAAGCTGGATCATCCTTAGCTGGAGCCAAGACGATAGATGCTAATACAGATTCTGTTGTCATGAACAATGATGATCAAGGGAAGAAGATTAAGAAGAAGTTAAAGGAGAAGAAGAAACTAACCAGCAAAAGCAAAAGAACAGAAGATGATGAATTCAAAAGCAATGGTGGTGATCAAGCTTTAGCTGAAAGTGATGAAGGTGATCCCAATTTAGAGAAAAGCAATATGGGGGATGCTGTTGAGCATGCCAGTTTTACCAAAGGTGATGATCAAGGCGAGAAGAAGAAGAAGAAAATGAAAAAGAAGAAGAGCAAGGAAGATAAAGTTAAGTTTTCTGATCAAGCTTTAGCTGAAAGTGATGAAGGTGATCCCAATTTGGCAAAACACAATATGGGGGATGCCGTTGAACATGCTAGTTTTATCAAAGGTGGTGATCAAGATGAGAAGAAGAAGAAAATGAAAAAGAATAAGAAGAGCAAGGAAGATAAACGGGTTAAGTTTTCTGATCAAGCTTTAGCTGAAAGTGATGAAGGTGATCCCGATGTAGCAAAACACAATGTGGGGGATGCTGCTGAACATGCTAGTTTTACCAAAGGTGACGATCAAGGAAAGAAGAAGAAAAAAATGAAAAAGAAGAAGAAAAGCAAGAAAGATAAGCGAGTTAAGTTTTCTGAACAAGTGGAGGTTTTCAATGATCACTTAGTACAAGGGAAAAGGTTTACACCAGAGGAAGATGAGAAGATTATAGAGGCTATTTACAACTATATATATTCTCATGGGTTGGGTGATCGTGATCAAGGGGTGGACATGATTCTCCATTGCTCATCTTATCCTAAGATTAGAGGTTGTTGGAAGGAAATTGCATCAGCTTTACCTCACCGGCCTCTAGAAAGCGTATATCATCGTGGTCATATTTTGTTTGAAAGGGATGACTCTCGTAAATGGACTCCTGAAGAGTTAGAAATCGTACGAAATTTCCATAAAAAGCATGGATCTAACTGGAAAATGTTGGCTGACGCAATGGGGAAACATCGGTTTCATGTAAAGGATGCATGGCGTAGGATAAAATTGGGAAATATCAATAGAGGAAATTGGTCACAAGAGGAGTATCAAAAATTATTTGATTTAGTAAATGCTGATCTATGTCTGAGGGCTTTAGAGGACAAAAGAAAACAAAAACATGGTATGTTACGGGACAATATATGCTGGGAGGCAATTGGTGATAAGGTGGCAACTAGAACCAGTCAACTTTGCTGTATGAAGTGGTATGAAAAATTAACATCTCCTCTTGTCGCTGAAGGTGAATGGGCTGATACTGATGACTATCGCCTGCTCAATGCTTTATATACATTGGATGCCTGCTGCATGGAGGAGGTGGAGTGGGATTATTTGCTTGAGCATAGGTCTGGTGATGTATGTAGAAAACGATGGAATCAAATGGTCCAGCATATTGGGGAGCATGGGAACAAGTCATTTTCTGAGCAAGTAGAAATTCTTTCCAAGAGATATCGTCCTGACTTAGTGGAAGCAAGAGAAGCCTTTGATAACAAGCCTGTGATCCCTTGA 1812 0.3869 MRITEENSKGNRKKRKKGKDNDEIINGIIDRDNEMQFLDDKQERKTKKRKHCNDSIPEMQEVFALKLRGENNGTEAIGLKSNEAGSSLAGAKTIDANTDSVVMNNDDQGKKIKKKLKEKKKLTSKSKRTEDDEFKSNGGDQALAESDEGDPNLEKSNMGDAVEHASFTKGDDQGEKKKKKMKKKKSKEDKVKFSDQALAESDEGDPNLAKHNMGDAVEHASFIKGGDQDEKKKKMKKNKKSKEDKRVKFSDQALAESDEGDPDVAKHNVGDAAEHASFTKGDDQGKKKKKMKKKKKSKKDKRVKFSEQVEVFNDHLVQGKRFTPEEDEKIIEAIYNYIYSHGLGDRDQGVDMILHCSSYPKIRGCWKEIASALPHRPLESVYHRGHILFERDDSRKWTPEELEIVRNFHKKHGSNWKMLADAMGKHRFHVKDAWRRIKLGNINRGNWSQEEYQKLFDLVNADLCLRALEDKRKQKHGMLRDNICWEAIGDKVATRTSQLCCMKWYEKLTSPLVAEGEWADTDDYRLLNALYTLDACCMEEVEWDYLLEHRSGDVCRKRWNQMVQHIGEHGNKSFSEQVEILSKRYRPDLVEAREAFDNKPVIP 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2974g00003 603 CDD SANT 446 508 IPR001005 -
Pral2974g00003 603 CDD SANT 396 425 IPR001005 -
Pral2974g00003 603 ProSiteProfiles Myb-like domain profile. 396 438 IPR001005 -
Pral2974g00003 603 ProSiteProfiles Myb-like domain profile. 510 563 IPR001005 -
Pral2974g00003 603 Coils Coil 112 132 - -
Pral2974g00003 603 SUPERFAMILY Homeodomain-like 395 455 IPR009057 -
Pral2974g00003 603 Pfam Myb-like DNA-binding domain 397 455 - -
Pral2974g00003 603 MobiDBLite consensus disorder prediction 123 138 - -
Pral2974g00003 603 MobiDBLite consensus disorder prediction 80 105 - -
Pral2974g00003 603 MobiDBLite consensus disorder prediction 80 302 - -
Pral2974g00003 603 MobiDBLite consensus disorder prediction 244 270 - -
Pral2974g00003 603 MobiDBLite consensus disorder prediction 286 301 - -
Pral2974g00003 603 SMART sant 393 440 IPR001005 -
Pral2974g00003 603 SMART sant 514 565 IPR001005 -
Pral2974g00003 603 SMART sant 318 391 IPR001005 -
Pral2974g00003 603 SMART sant 443 510 IPR001005 -
Pral2974g00003 603 PANTHER GB|AAC33480.1 8 603 - -
Pral2974g00003 603 MobiDBLite consensus disorder prediction 188 209 - -
Pral2974g00003 603 SUPERFAMILY Homeodomain-like 488 572 IPR009057 -
Pral2974g00003 603 Gene3D - 437 512 - -
Pral2974g00003 603 MobiDBLite consensus disorder prediction 1 55 - -
Pral2974g00003 603 Gene3D - 398 436 - -
Pral2974g00003 603 ProSiteProfiles Myb-like domain profile. 439 508 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2974g00003 Pral-Chr2974 33605 37154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2974g00003 374 564 MYB Transcription Factor Family AT4G32730 24.631 4.70e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral2974g00003 Myb_DNA-bind_6 1.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2974g00003 - - pcin:129298814 641.728