Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2974g00001 ATGTCAAGTATGGATGCCTCTTCCAGTACATGTGAGATTGTGGAATCAAGAGAAGAGATTATTTCTGAGTTCAGAATGGATGAAAAAGCTGAGAGTAGTTGTGCCCACAGATCAAGGAAAAAGGGTTCTGTAGAGGATGATATTGATCGTCTCTTCCAAGCTATTGACTTCAAAAATTCAGCTAGAGGTTCTAGTACACCACGTTCTCAAAAGAGTGCTCTTAAAAGGCCAATAAAAGTTAGTTCATCTCAGGCATCAGGAATTGGGATTGCAGAGCCTGTAAGTTTAAAGCAGGCACTTAGAGGACTTTGCATATCTCAGGCATCAGAGATGGCTGCTTTGAAGCGACTGTCAAAGCCGTCCAGTTCGTCAAGAGCATCTGAGGCGGGAACTATTAAGAAACTGTATACAGCTGTGGTAGATGAGGGGAAAGGGAACTTGGTGGAAATCTCCCTTGTGCCTGAGATTTCTGGACCTTCTGGTAAAATGCCTAGGGAAGATAAGTCTAGTTCTACTGCTGATCATTCTACTCATTTTGTTGATGTAACAAATCCAAAAACAGTCACAACCAGGGTAGCATCCCGGGATCAGATTGTTCCTCTTCAATCGGAAGGTGAAAGTGAGAAGTTAGTTGCAGTTGCCGGAAAACCAGTACTTCCAAATGCATCTACAGTTGATTATGAAAGTGAGGAAATGTCTGAGGTCAAGACTGTTTCTGCTTCCTCAAGCAAAGCTTCCCACTGTCCTACTATGCTAGATAAGGGCCAGGAAGTAGAGTTACATTCTGAAGCTAATCAGCCAAGCTCTAGTACGAGCAGTGGGGTGGAGAAATCCACAAGCAGTACTACTTGTTTGGCAAAGCCAATGTTCAGGAACATGAGCTTCCTTAGGAAAAAGGTAAAGCAAGAATTATGTTCTACCTCTAGTGGCTCCACACAATGTACCAGAAAAGTTGACAATGACTTGGATCCTAGTACGAGTAATTTGAACAAAGAGACCGATAAATATAATTCGAAGCAGGAAATGAAAGAAAATGATAAATTGTCTCCCAGCAGTTCAAATCATAGTGTTGAAGTAAATTCAAATAATGTGGGTGCAGATTCAATCAAAAGTGGTTTCAGTATGAATTGCAGTAAGAAAACTAAATTTCTAGTGACAAAAATTGATGAAAAATCAAGATCAAAAGAAAAGGGTGAATTTTCCCAAAGCTCAAAAAGCAGCATTGGTGAGTATAGTAGTAGCACAACGACAAGCATAAGTGAAGAGAGCAATCTGAGTGGCTCTAGTCGCAGTGGTCACAGGCCTCACATGTCAAAACACTTGAGATGGGAAGCTGTTCGTGCTGTTCAGCAGCAGCATGGGAACTTAAGTTTGAAACACTTCAAGCTGCTCAGGAGGCTTGGTTGTGGGGACATTGGAACTGTTTATCTTGCAGAACTAATTGGTACAAGCTGCCTTTTTGCCTTGAAAGTGATGGATAATGAGTTTTTGGCCAACCGGAAGAAAATTTTCAGGGCCCAGACTGAGAGAGAGATCCTGCAGATGCTGGATCATCCTTTTCTTCCAACACTCTATGCCTATATTACAACTGATAAGCTCTCTTGCTTGGTTATGGAGTATTGCCCAGGTGGAGATCTACATGTGCTGCGCCAGAGGCAACCATATAGGAGTTTCTCAGAACAAGCAACCAGGTTTTATGTTGCTGAAGTTCTTCTTGCCCTGGAGTATTTGCACATGCTAGGAGTCATATATCGAGACTTGAAGCCTGAAAATATCCTTGTTCGAGAAGATGGCCACATTATGCTGACGGATTTTGACTTATCACTTAGGTGTTCTGTGAATCCCACGTTAGTCAAGTCATCTTCGCCGGATGTGGAATCAACAAAGAAGATGTCCAGCCCTGTTCAGAGGCCAGCTGCATACACCCTTTCT 1932 0.4239 MSSMDASSSTCEIVESREEIISEFRMDEKAESSCAHRSRKKGSVEDDIDRLFQAIDFKNSARGSSTPRSQKSALKRPIKVSSSQASGIGIAEPVSLKQALRGLCISQASEMAALKRLSKPSSSSRASEAGTIKKLYTAVVDEGKGNLVEISLVPEISGPSGKMPREDKSSSTADHSTHFVDVTNPKTVTTRVASRDQIVPLQSEGESEKLVAVAGKPVLPNASTVDYESEEMSEVKTVSASSSKASHCPTMLDKGQEVELHSEANQPSSSTSSGVEKSTSSTTCLAKPMFRNMSFLRKKVKQELCSTSSGSTQCTRKVDNDLDPSTSNLNKETDKYNSKQEMKENDKLSPSSSNHSVEVNSNNVGADSIKSGFSMNCSKKTKFLVTKIDEKSRSKEKGEFSQSSKSSIGEYSSSTTTSISEESNLSGSSRSGHRPHMSKHLRWEAVRAVQQQHGNLSLKHFKLLRRLGCGDIGTVYLAELIGTSCLFALKVMDNEFLANRKKIFRAQTEREILQMLDHPFLPTLYAYITTDKLSCLVMEYCPGGDLHVLRQRQPYRSFSEQATRFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVNPTLVKSSSPDVESTKKMSSPVQRPAAYTLS 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2974g00001 644 MobiDBLite consensus disorder prediction 59 83 - -
Pral2974g00001 644 SUPERFAMILY Protein kinase-like (PK-like) 434 613 IPR011009 -
Pral2974g00001 644 MobiDBLite consensus disorder prediction 234 249 - -
Pral2974g00001 644 MobiDBLite consensus disorder prediction 334 348 - -
Pral2974g00001 644 MobiDBLite consensus disorder prediction 394 437 - -
Pral2974g00001 644 MobiDBLite consensus disorder prediction 216 283 - -
Pral2974g00001 644 MobiDBLite consensus disorder prediction 261 283 - -
Pral2974g00001 644 ProSiteProfiles Protein kinase domain profile. 461 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2974g00001 644 FunFam Serine/threonine-protein kinase D6PK-like 459 544 - -
Pral2974g00001 644 PANTHER FLIPPASE KINASE 1-RELATED 269 628 - -
Pral2974g00001 644 Pfam Protein kinase domain 462 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2974g00001 644 SMART serkin_6 461 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2974g00001 644 MobiDBLite consensus disorder prediction 305 371 - -
Pral2974g00001 644 MobiDBLite consensus disorder prediction 155 188 - -
Pral2974g00001 644 FunFam serine/threonine-protein kinase D6PK-like 545 612 - -
Pral2974g00001 644 MobiDBLite consensus disorder prediction 305 333 - -
Pral2974g00001 644 MobiDBLite consensus disorder prediction 619 644 - -
Pral2974g00001 644 Gene3D Phosphorylase Kinase; domain 1 459 540 - -
Pral2974g00001 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Pral2974g00001 644 MobiDBLite consensus disorder prediction 349 371 - -
Pral2974g00001 644 Gene3D Transferase(Phosphotransferase) domain 1 541 610 - -
Pral2974g00001 644 MobiDBLite consensus disorder prediction 401 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2974g00001 Pral-Chr2974 17 4342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2974g00001 409 633 AGC Kinase Gene Family AT5G03640 69.528 3.03e-109 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral2974g00001 Pkinase 3.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2974g00001 - - gmx:100789339 814.298