Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2971g00002 ATGGCTGATTCAGTGCATGCTAGCAGCGATAGTAAAATTCCGAATTTGATTTCCGCTAAGAAGTCATTGAAGCTTAGCCTGGAGAAGTCAAAGTCCCTAGGGTTAGCTTTGGAGAAGGCTGGACCTAGATTGGAGGAGATTAGCCAAAGATTGCCTTCCCTTGAATCTGCTGTTCGCCCCATTCGTGCTGACAAGGACGCCCTTGCGGCTGTTGGCGGACACATTAATCGAGCCGTTAGCCCCGCAGCTGCCGTGCTCAAGGTTTTTGATGCTGTACATGGCCTCGAAAAGTCACTGTTATCTGATCCGCGTAATGATCTCCCGGGTTATTTGTCAGTGGTGAAGCGCCTCGAAGAGGCACTGAGGTTCTTGGCAGATAACTGTGGATTGGCAATTCAATGGTTGGAGGATATTGTGGAGTACTTGGAAGATAATACTGTTGCTGATGAAAGGTATCTGTCAAATTTGAAGAAGTCACTTCAAAATCTTCGTGAATTGCAAAATGAAGAGGGGAAGGCCCGACTGGATGGTGGGCTTTTAGAAGCAGCATTGCAAAAACTGGAAAATGAATTCCGGCAGCTGTTGACTGAAAACAGTGTTCCGCTTCCAATGTCACCATCGCCTACGCTTGCTGGTCAGGCATGCATTGCTCCTTCACCTTTACCAGTATCTATTATTCACAAGTTGCAAGCAATTCTTGGCAGATTGATCGCTAACAATAGACTCGAGAAATGCATATCAATTTATGTTGAAGTCCGTAGTTCAAACGTCAGAGCAAGCCTGCAGGCTCTCAATCTGGATTACCTTGAGATCTCAGTATCTGAATTCAATGATGTGCAGAGCATTGAGGGATATATAGCCCAATGGGGAAAGCATTTAGAGTTTGCAGTGAAGCATTTGTTTGAAGCTGAGTATAAACTTTGTAATGATGTATTTGAGAGGATTGGATTGGATGTGTGGATGGGCTGCTTTTCAAGGATAGCTGCACAGGCCGGTATACTTGCATTTCTTCAATTTGGGAAGACTGTTACAGAGAGTAAGAAAGATCCCATCAAACTGTTAAAACTATTGGACATATTTGCATCTCTGAACAAATTGAGATTGGATTTCAACCGCCTTTTTGGTGGAGCAGCATGTGTTGAAATTCAGAACTTGACTAGGGATCTAATCAAGAGTGTGATTGATGGGGCAGCGGAGATTTTCTGGGAACTTCTGGTCCAGGTAGAGTTACAGAGACAGAATCCACCTCCTCTTGACGGCAATGTCCCGAGACTGGTGAGTTTTATTACTGATTATTGTAACAAACTCCTAGGGGATGACTATAAGCCAATATTGACACAAGTCCTTGTCATACACCGGAGTTGGAAACGGCAGAGCTTTCAGGAGAGACTCCTGGTGAATGAGGTTTTAAACATTATTAAAACCGTAGAGTTGAATTTGGAGACATGGATCAAGGCTTATGACGATCCTATGCTATCAAACTTCTTTGCTATGAACAATCACTGGCATCTGTTCAAGCACTTGAAAGGAACAAAGCTTGGGGATCTCTTGGGAGATACTTGGTTGAAAGAACATGAGCAGTACAAGGACTATTACTCCACAATTTTCTTGAGGGATAGCTGGGGAAAGCTTCCTGGTCATTTGAGCAGGGAAGGGCTGATTCTGTTCTCAGGAGGGCGTGCTACTGCTCGTGATCTGGTCAAGAAAAGGTTGAAAAAGTTCAATGAAGTTTTTGATGAGATGTATACAAAGCAATCAACCTGGGTTATGCCAGAACGAGATCTAAGGGAGAAAACAACCCAGCTTATAGTGCAAGCCGTGGTTCCTGTTTACAGGAGTTACATGCAGAATTATGGTCCCTTGGTTGAGCAAGATGCCAGCTCCTCAAAATATGCAAAATATAGTGTGCAGAAGCTGGAGGAAATGCTTTCGTCTCTTTATCAGCCGAAGCCTGTAAGACACGCCAGTTTGAAAGGTCGGCAATTTAGTGAGAAATTTGGCAATAAAATGGTGGATCTTCGTCGCACTGCCTCTGCAGTTGTGTAA 2046 0.4399 MADSVHASSDSKIPNLISAKKSLKLSLEKSKSLGLALEKAGPRLEEISQRLPSLESAVRPIRADKDALAAVGGHINRAVSPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVVKRLEEALRFLADNCGLAIQWLEDIVEYLEDNTVADERYLSNLKKSLQNLRELQNEEGKARLDGGLLEAALQKLENEFRQLLTENSVPLPMSPSPTLAGQACIAPSPLPVSIIHKLQAILGRLIANNRLEKCISIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSRIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAACVEIQNLTRDLIKSVIDGAAEIFWELLVQVELQRQNPPPLDGNVPRLVSFITDYCNKLLGDDYKPILTQVLVIHRSWKRQSFQERLLVNEVLNIIKTVELNLETWIKAYDDPMLSNFFAMNNHWHLFKHLKGTKLGDLLGDTWLKEHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYTKQSTWVMPERDLREKTTQLIVQAVVPVYRSYMQNYGPLVEQDASSSKYAKYSVQKLEEMLSSLYQPKPVRHASLKGRQFSEKFGNKMVDLRRTASAVV 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2971g00002 681 Gene3D Exocyst complex component Exo70 136 655 - -
Pral2971g00002 681 SUPERFAMILY Cullin repeat-like 85 647 IPR016159 -
Pral2971g00002 681 FunFam Exocyst subunit Exo70 family protein 135 653 - -
Pral2971g00002 681 PANTHER EXOCYST COMPLEX PROTEIN EXO70 76 643 IPR004140 GO:0000145|GO:0006887
Pral2971g00002 681 Pfam Exo70 exocyst complex subunit 288 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pral2971g00002 681 Coils Coil 149 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2971g00002 Pral-Chr2971 14361 16872 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2971g00002 1 681 EXO70 exocyst subunit family AT4G31540 75.327 0.0 1074
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2971g00002 K07195 - gmx:100796139 1125.92