Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2968g00006 | ATGGTCGCGCTATTCACTGTAGGCGTAGCAGCAATCAGCTGTTCCCAGCTTCACCACTCTTGCACCCACCACCCTCCCCTCCCTTTCCCTCCTCTCCTCCTCTATATCTGTGTCACATTCTCCCTCTCCTCCTTCCTTCAGCTTCAAAGGAGCACCGTCGATGCGTCGCCGGAGGCCACTGTCGGGGGAGGTGCAACCAGCAACGACCTCTCCGTTTTCGCCGGAGGCGGCCCTAAGTTCGAGGACTTCCTGGGCGGCTCCTCCGTTACGTCGGTCACATCTGCAGTACCCACGCCGCCTGCTTCTCAGTTCTCCGCCGACAACGTATTCGGTTCTGAGCTCAAAACCATAACCGCCGGGTTCCTCCCCGGCTTGGCCGCCGCTGAACGAGCTGAGCCGCAAAAACAGGCGCTGGCTCTAACCGTGCCGTCCTCTAAGAAGACTGCGGACACCTTCGGCCAACGCACCTCCATCTACCGCGGCGTCACCCGGCATAGATGGACGGGAAGATACGAAGCACATCTATGGGATAATAGTTGCAGAAGAGAAGGTCAAAGCAGGAAAGGAAGGCAAGTTTATTTGGGTGGCTACGATAAGGAAGAGAAAGCAGCCAGGGCTTATGATCTTGCCGCTCTCAAATATTGGGGTCCGACCACCACCACCAACTTTCCAATTTCCAACTATGAGAAGGAACTGGAAGAGATGAAGAAAATGACAAGACAGGAATTTGTTGCTTCGCTACGAAGGAAGAGTAGTGGTTTTTCTAGAGGAGCATCAATATACAGAGGAGTGACAAGGCACCACCAGCATGGGCGATGGCAAGCAAGAATCGGCAGAGTTGCCGGAAATAAAGACCTTTATCTCGGCACTTTTAGTACTCAAGAAGAAGCTGCTGAAGCATACGATATAGCAGCCATAAAATTTAGAGGGCTGAGTGCAGTGACCAACTTTGACATGAGCCGATACGACGTCAAGAGCATAGCCAACAGCAGTCTTCCAGTTGGAGGATTCTCATCCAAACCCAAGAACTCATCAGATTCTTCTGCATCAGACAGCAAAAGCAACGATGGAGGTAGTCGATCGACAGATAACATCGACCGGGATCCATCCTCCACCTCATCGGCAACCTTTGCCTCCCAACCCTCGACCTCCAACCTCAGCTTCGCCGTACCCATCATCAAACAAGATCCGACCACTGATTACTGGTCCAACATCTTCGGTTACCAGAACCCTTCATCTTTCAAAAACATTCCAAACGGTGTTACCATGGCCTCTCCTTTGCAAAACTACAACAATAATAGCAGCTCACCGGTACCGTTCAGCTTGGAGTTGCAGAGAAATAACAATGCATTTATGAATGAGGGTGTGGTTGTTCAGAACATTCATCAGCAACAAAGTGGAAGCAGCAATAATAATAACAGCAGTAGTAGTGCTGGAACAGTGCATTCGAGTTCAAGTTCAGGGATCCCATTGGCCACGCCCATAGGTTTAAATAGTAATGGTGGTTATGAGAGTTCTTCTGAATATGGAAACTGGAGCATAGGGCCTGGTGGGTTGCACACATTCCAAACACATGCAAAAGGAAGTCTCTATCAAACGCCAATATTTGGGATGGAATGA | 1620 | 0.5031 | MVALFTVGVAAISCSQLHHSCTHHPPLPFPPLLLYICVTFSLSSFLQLQRSTVDASPEATVGGGATSNDLSVFAGGGPKFEDFLGGSSVTSVTSAVPTPPASQFSADNVFGSELKTITAGFLPGLAAAERAEPQKQALALTVPSSKKTADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPISNYEKELEEMKKMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLSAVTNFDMSRYDVKSIANSSLPVGGFSSKPKNSSDSSASDSKSNDGGSRSTDNIDRDPSSTSSATFASQPSTSNLSFAVPIIKQDPTTDYWSNIFGYQNPSSFKNIPNGVTMASPLQNYNNNSSSPVPFSLELQRNNNAFMNEGVVVQNIHQQQSGSSNNNNSSSSAGTVHSSSSSGIPLATPIGLNSNGGYESSSEYGNWSIGPGGLHTFQTHAKGSLYQTPIFGME | 539 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2968g00006 | 539 | ProSiteProfiles | AP2/ERF domain profile. | 158 | 224 | IPR001471 | GO:0003700|GO:0006355 | |
Pral2968g00006 | 539 | SUPERFAMILY | DNA-binding domain | 157 | 226 | IPR016177 | GO:0003677 | |
Pral2968g00006 | 539 | CDD | AP2 | 157 | 226 | IPR001471 | GO:0003700|GO:0006355 | |
Pral2968g00006 | 539 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 112 | 431 | - | - | |
Pral2968g00006 | 539 | PRINTS | Ethylene responsive element binding protein signature | 159 | 170 | IPR001471 | GO:0003700|GO:0006355 | |
Pral2968g00006 | 539 | PRINTS | Ethylene responsive element binding protein signature | 300 | 320 | IPR001471 | GO:0003700|GO:0006355 | |
Pral2968g00006 | 539 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 157 | 226 | - | - | |
Pral2968g00006 | 539 | SMART | rav1_2 | 260 | 324 | IPR001471 | GO:0003700|GO:0006355 | |
Pral2968g00006 | 539 | SMART | rav1_2 | 158 | 230 | IPR001471 | GO:0003700|GO:0006355 | |
Pral2968g00006 | 539 | SUPERFAMILY | DNA-binding domain | 259 | 320 | IPR016177 | GO:0003677 | |
Pral2968g00006 | 539 | ProSiteProfiles | AP2/ERF domain profile. | 260 | 318 | IPR001471 | GO:0003700|GO:0006355 | |
Pral2968g00006 | 539 | Gene3D | AP2/ERF domain | 260 | 320 | IPR036955 | GO:0003700|GO:0006355 | |
Pral2968g00006 | 539 | Gene3D | AP2/ERF domain | 158 | 226 | IPR036955 | GO:0003700|GO:0006355 | |
Pral2968g00006 | 539 | MobiDBLite | consensus disorder prediction | 333 | 381 | - | - | |
Pral2968g00006 | 539 | FunFam | AP2-like ethylene-responsive transcription factor | 259 | 320 | - | - | |
Pral2968g00006 | 539 | MobiDBLite | consensus disorder prediction | 463 | 487 | - | - | |
Pral2968g00006 | 539 | Pfam | AP2 domain | 260 | 310 | IPR001471 | GO:0003700|GO:0006355 | |
Pral2968g00006 | 539 | Pfam | AP2 domain | 158 | 216 | IPR001471 | GO:0003700|GO:0006355 | |
Pral2968g00006 | 539 | CDD | AP2 | 259 | 320 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2968g00006 | Pral-Chr2968 | 43989 | 47709 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2968g00006 | 99 | 539 | AP2-EREBP Transcription Factor Family | AT5G57390 | 54.255 | 6.76e-150 | 435 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Pral2968g00006 | AP2 | 4.1e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2968g00006 | K09285 | - | gmx:100803558 | 561.992 |