Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2968g00005 ATGAAGTATATTCGGAGCAATAGCTTCAAGCGTCTCTTCTCCTTCAAGCGACGCAGTTTTGGGGAACAAGTTTTGACCCCTGCAGGCGCAGAAACTCCTGGAAGACCCACTTGGAAATGCTTCTCTTATCAAGAACTATTTGATGCCACCAATGGCTTCTGCTCTGAGAATCTGGTTGGAAAAGGAGGGCATGCAGAGGTTTATAAGGGAAGATTAGAGGATAAAGAGGAAATCGCAGTGAAGAGGCTAACAAAAAGCTGCAATGATGAGAGGAAAGAGAAGGAATTTCTAACAGAGATTGGAACAATTGGTCATGTTTGTCATTCAAATGTTTTACCTCTTCTTGGTTGCTGTATTGACAATGGACTTTACCTCGTTTTTGAGTTTTCCTCTAGAGGCTCTGTAGCTTCTCTTCTTCATGATGAGAATAAGCCCGCCATGGAATGGAAAGTAAGGCATAAAATTGCTCTTGGGACTTCACGTGGCCTCCATTACTTGCACAAGGGTTGCCAGAGAAGGATAATTCACAGAGACATCAAGGCCTCCAACGTTCTTTTGACTTCAGATTTTGAACCACAGATATCTGATTTTGGACTTGCGAGATGGCTTCCTTCACAGTGGTCTCATCATTCCATTGCCCCAATTGAAGGCACATTTGGGCATTTGGCTCCTGAGTATTACCTGCATGGAATTGTGGATGAGAAAACTGATGCATTTGCATTTGGGGTGTTTCTGTTGGAACTCATCTCTGGGAAGAAACCTGTGGATGGATCAAACCAGAGTCTACACAATTGGGCTAGGCCAATATTGAAGAGAGGAGAGCTAGAAAAATTGGTGGATCCAAGGCTTGAAGGAGCTTATGATGTTTCAGAGTTAACAAAGCTTGCTTTTGCAGCCTCTCTGTGTATCCGACCATCTTCCACTTGGAGACCTACCGTGACTCAGGTATTAGAGATGATGGAGGAGGGAGAAATAGATAAAGATAAATGGAAAATGCCAGAAGAAGAAGGGGAAGGAGAAGATCAGGAGGTTTGGGGTTTTGAGGATTTGGAATATGAATGTGATAGTTTCTCCTCAGTGTCCCTCCCTGACTCCATTGCAAGTAATTAG 1110 0.4351 MKYIRSNSFKRLFSFKRRSFGEQVLTPAGAETPGRPTWKCFSYQELFDATNGFCSENLVGKGGHAEVYKGRLEDKEEIAVKRLTKSCNDERKEKEFLTEIGTIGHVCHSNVLPLLGCCIDNGLYLVFEFSSRGSVASLLHDENKPAMEWKVRHKIALGTSRGLHYLHKGCQRRIIHRDIKASNVLLTSDFEPQISDFGLARWLPSQWSHHSIAPIEGTFGHLAPEYYLHGIVDEKTDAFAFGVFLLELISGKKPVDGSNQSLHNWARPILKRGELEKLVDPRLEGAYDVSELTKLAFAASLCIRPSSTWRPTVTQVLEMMEEGEIDKDKWKMPEEEGEGEDQEVWGFEDLEYECDSFSSVSLPDSIASN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2968g00005 369 Gene3D Transferase(Phosphotransferase) domain 1 131 341 - -
Pral2968g00005 369 Gene3D Phosphorylase Kinase; domain 1 28 129 - -
Pral2968g00005 369 Pfam Protein kinase domain 56 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2968g00005 369 FunFam Putative receptor-like serine/threonine-protein kinase 131 346 - -
Pral2968g00005 369 SMART serkin_6 53 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2968g00005 369 FunFam Putative receptor-like serine/threonine-protein kinase 22 129 - -
Pral2968g00005 369 ProSitePatterns Protein kinases ATP-binding region signature. 59 81 IPR017441 GO:0005524
Pral2968g00005 369 PANTHER OS08G0249100 PROTEIN 32 350 IPR046958 -
Pral2968g00005 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Pral2968g00005 369 SUPERFAMILY Protein kinase-like (PK-like) 34 320 IPR011009 -
Pral2968g00005 369 ProSiteProfiles Protein kinase domain profile. 53 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2968g00005 Pral-Chr2968 25610 29142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2968g00005 39 342 Receptor kinase-like Gene Family AT1G60800 42.628 1.64e-73 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pral2968g00005 Pkinase 6.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2968g00005 - - ahf:112697971 594.349