Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2966g00014 ATGGGTCTCAAGGGAACCTTGCCCTCACAGATTGGCAATTTGTCGTTCTTAGTGAAACTTGACCTCAGCAGCAACAACTTGTATGGTAAGTTGCCAGAAGAGTTGCTTCAGTTGCAGACGTTAGAAACTCTCAACTTGAGCTATAATGCTTTCAGTGGAGAAATTCCAAGTTCGATAGGAAGCTTATTTATGCTTCAACACTTGATTCTTGGCAATAATAACATTGGAGGCATCATTCCTGCAAGTATATCCAATTTGTCTAAGTTGGAGACCTTGGATTTGAATTCTAACTCTCTCCAAGGATCTATTCCGTTTGATATTGGAAGACTTCAACGTCTCAAAATTTTACGCCTTTCTGTAAACAAGCTTTCAGGAATTATGCCTCCATCTATTTCTAACATTTCCTCACTTGAGCGGCTCATTTTGTCTCTCAACCTCTTACAAGGATATATTCCCATAGAAATGAATAAGCTTACAAAGCTGAAAATTATATACTTGGGAGGTAATAAGTTGAGTGGCCAAATACCAAGAAGTATTGGGAACTTGATCATGCTTCAAGAGTTATCTCTTTCAAACAATAACTTACAAGGAGACATTCCCAACGAAATTAGCAATCTTACAAATGCGAAGAATATATACCTGGAAACCAATCAATTGTCTGGTCACATACCAAAAAGCATTGGAAAATTGACAACGCTTCAAGAGTTATCTCTTGCCAACAACAACTTTGAAGGAATTATTCCCAATGAAATTAGAAGCCTTACAAATCTGAAAATAATGGACCTATCAGCCAATCAACTATTTGGCCACATACCAAGAGGCATTGAAAACTTGACTATGCTTCAAAATTTGGACCTTGAAAACAATAATTTAGAAGGCTCAATACCTTTGGAAATAGGCAATCTTCAACAACTTGAGACATTATTGTTGTCTCAAAACAAATTGACCGAATATATTCCATCCGAAGTTTTCAACATCTCAACTTTAGAATTCTTGTCTCTCTCAAACAATTCTCTATCAGGAAGTCTTCCATCAGATCTTGGATATGGCCTTCCTCATCTACAAGAGTTGTATTTATGGGGCAACAAACTTTCTGGAAGAATCCCGAGTACTATATCCAATGCTTCTAAGTTAACCATTCTAGAATTGGAGCAAAATAATTTTGAAGGGGTTTTACCAAGCACACTTGGACATTTAAGATACTTAGAAACCCTTTCGGTGCATGGTAACAATTTCACCATAATAGATGATTTAAATTCTGAAACTGGCTTTTTTAGCTCGTTGTCAAAATGTAGACATTTGAAAACTCTGATTCTCTCAGAGAACCCATTGCGTATGAAACTTCCCAACTCCATTGGAAACTTATCTGATTCTTTACAGATGCTGATGATCGACTTCTGCGGGATTTATGGTAACATACCATCAGAAATTGGGAAGCTATCTAACTTGTTTGAGATATCTTTTGCTGGAAATGTTTTAAATGGATCAATTCCAGCAACAATTAGCAATTTACAGGCTCTTCAGCATTTGAATCTTGTGGGTAATGAGCTAGATGGTTTCATTGTAGATGAGCTTTGTGACATTAGAACACTTGCATATTTATATCTATCTCGAAACAAGCTTTCTGGAGCAATGCCCCCTTGCTTAGGAAACCTTATGTCCCTACGGCGACTTTACTTGGGCGGCAATAAGTTGATTTCCGATATACCTTCTTCCTTTTGGAACTTGACGGGTATATTGGAAGTAAACCTATCTTCCAATATGTTAGTTGGAAATCTTTCATTCAAGATTGGGAACATGAAAGCTCTTATTCGATTAGACTTGTCAAGAAATCATATTTCAGGCACCATTCCATCAACCATAGGCAGCTTACCAAATTTGCAAAATGTCTCCTTAGCAGATAACATATTGCAAGGGACGATTCCGGAATCACTTGGGAATTTGCTGAGCTTAGTAAAGCTAGACCTTTCCCAAAATAATTTGTCTGGTGAGATTCCTAAATCACTAGAGTCACTTACATCCCTTAAGTATGTTAATCTCTCTGACAACAGACTGCAAGGTGAGATTCCTAGTGGTGGGGTCTTCAAAGATTTGACGGCTGAATCTTTCATGATGAATAAAGCACTTTGTGGTGAGCCGAAAATGCAAGTGCCTCCATGCAGAAAAGAACAAAGAAAGAGGTCAAAGGCAAAATGGATTTTGTTGAAATACATACTACCTATGGTTTTGTCAGCAATTTTAGTTCTTTCAGGCATTATCCTGTTTCATCGTAAACGAAGGAATTCTAGGCATACCATAATGAAACAAGATTTATCAACTTTAGGAATGCCAAGAAGGATTTCGTATTTTGAAATATTGGATGCAACCAACAGATTTGATGAGAGTAACTTACTGGGAAGTGGAAGTTTTGGTTCTGTATTCAAAGGAAGGCTTTCAAATGGAATAATGGTTGCTTTTAAAATATTTAATTCTGATTCAGAAGCTATGTCAAAGAGCTTTGAAGTGGAATGTGACACAATGCGTAATGTGCGTCACCGCAATTTGGTGAAGATCATTAGTAGTTGTTCCAGTGATGACTTCAAGTGTTTGATAATGGAGTTCATTCCCAATGGAAGTCTTGAAAAATGGTTATATTCTCATAACTACTGTTTGGATTTTCTGCGAAGGTTAAATATAATGATAAATATTGCATCTGCTTTGGAGTATCTCCATCATGGCTTGCCAACACAAATAGTTCACTGTGATCTGAAGCCAAGTAACATTTTGTTAGATGATAACATGGTTGCTCATGTGAGTGACTTTGGAATTGCAAAATTTTTAGATAAAGGGAAATCTAGGACACTCACAGAAACAATACCTACAATTGGTTATGTAGCACCAGAATATGGATCTCTTGGAATTGTTTCAGCAAAAGTTGATGTGTACAGTTTCGGAATAATACTGATAGAAGTATTCACAAGAAAAAGGCCAACAGAAGATATGTTTGTGGATGGACTGAACTTAAATAGCTGGGTAAGTGAATCAATGTCACATTCAGTAACTCAAGTCATAGATTCCAATTTATTACAAGGAGATCATGATGAACAATATGTGGCTAACATTTTGACATGCACATCCACTATTCTTCAATTGGCCTTGAATTGTTGTGCCAATTTTTCACAAAGGCGTTGCAATATGTCAGAGGTTGTGGTATCATTAAACAAGATCAAGGACATGTTTGTTCAATCACGTCATTTAAAGAAATATTGA 3249 0.3669 MGLKGTLPSQIGNLSFLVKLDLSSNNLYGKLPEELLQLQTLETLNLSYNAFSGEIPSSIGSLFMLQHLILGNNNIGGIIPASISNLSKLETLDLNSNSLQGSIPFDIGRLQRLKILRLSVNKLSGIMPPSISNISSLERLILSLNLLQGYIPIEMNKLTKLKIIYLGGNKLSGQIPRSIGNLIMLQELSLSNNNLQGDIPNEISNLTNAKNIYLETNQLSGHIPKSIGKLTTLQELSLANNNFEGIIPNEIRSLTNLKIMDLSANQLFGHIPRGIENLTMLQNLDLENNNLEGSIPLEIGNLQQLETLLLSQNKLTEYIPSEVFNISTLEFLSLSNNSLSGSLPSDLGYGLPHLQELYLWGNKLSGRIPSTISNASKLTILELEQNNFEGVLPSTLGHLRYLETLSVHGNNFTIIDDLNSETGFFSSLSKCRHLKTLILSENPLRMKLPNSIGNLSDSLQMLMIDFCGIYGNIPSEIGKLSNLFEISFAGNVLNGSIPATISNLQALQHLNLVGNELDGFIVDELCDIRTLAYLYLSRNKLSGAMPPCLGNLMSLRRLYLGGNKLISDIPSSFWNLTGILEVNLSSNMLVGNLSFKIGNMKALIRLDLSRNHISGTIPSTIGSLPNLQNVSLADNILQGTIPESLGNLLSLVKLDLSQNNLSGEIPKSLESLTSLKYVNLSDNRLQGEIPSGGVFKDLTAESFMMNKALCGEPKMQVPPCRKEQRKRSKAKWILLKYILPMVLSAILVLSGIILFHRKRRNSRHTIMKQDLSTLGMPRRISYFEILDATNRFDESNLLGSGSFGSVFKGRLSNGIMVAFKIFNSDSEAMSKSFEVECDTMRNVRHRNLVKIISSCSSDDFKCLIMEFIPNGSLEKWLYSHNYCLDFLRRLNIMINIASALEYLHHGLPTQIVHCDLKPSNILLDDNMVAHVSDFGIAKFLDKGKSRTLTETIPTIGYVAPEYGSLGIVSAKVDVYSFGIILIEVFTRKRPTEDMFVDGLNLNSWVSESMSHSVTQVIDSNLLQGDHDEQYVANILTCTSTILQLALNCCANFSQRRCNMSEVVVSLNKIKDMFVQSRHLKKY 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2966g00014 1082 Gene3D Ribonuclease Inhibitor 152 247 IPR032675 -
Pral2966g00014 1082 Pfam Leucine Rich Repeat 160 182 IPR001611 GO:0005515
Pral2966g00014 1082 Pfam Leucine Rich Repeat 185 206 IPR001611 GO:0005515
Pral2966g00014 1082 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 427 724 - -
Pral2966g00014 1082 SUPERFAMILY RNI-like 368 691 - -
Pral2966g00014 1082 ProSitePatterns Serine/Threonine protein kinases active-site signature. 911 923 IPR008271 GO:0004672|GO:0006468
Pral2966g00014 1082 ProSiteProfiles Protein kinase domain profile. 792 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2966g00014 1082 SUPERFAMILY L domain-like 3 174 - -
Pral2966g00014 1082 Gene3D Transferase(Phosphotransferase) domain 1 868 1080 - -
Pral2966g00014 1082 Pfam Leucine Rich repeat 38 54 IPR001611 GO:0005515
Pral2966g00014 1082 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 352 1068 - -
Pral2966g00014 1082 SUPERFAMILY Protein kinase-like (PK-like) 773 1066 IPR011009 -
Pral2966g00014 1082 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 224 319 - -
Pral2966g00014 1082 SMART serkin_6 792 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2966g00014 1082 SMART LRR_sd22_2 648 674 - -
Pral2966g00014 1082 SMART LRR_sd22_2 86 107 - -
Pral2966g00014 1082 SMART LRR_sd22_2 302 328 - -
Pral2966g00014 1082 SMART LRR_sd22_2 110 136 - -
Pral2966g00014 1082 SMART LRR_sd22_2 158 184 - -
Pral2966g00014 1082 SMART LRR_sd22_2 351 377 - -
Pral2966g00014 1082 SMART LRR_sd22_2 254 277 - -
Pral2966g00014 1082 SMART LRR_sd22_2 480 506 - -
Pral2966g00014 1082 SMART LRR_sd22_2 278 299 - -
Pral2966g00014 1082 SMART LRR_sd22_2 399 420 - -
Pral2966g00014 1082 SMART LRR_sd22_2 552 571 - -
Pral2966g00014 1082 ProSiteProfiles Leucine-rich repeat profile. 650 673 IPR001611 GO:0005515
Pral2966g00014 1082 Gene3D Phosphorylase Kinase; domain 1 775 867 - -
Pral2966g00014 1082 Gene3D Ribonuclease Inhibitor 419 729 IPR032675 -
Pral2966g00014 1082 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 212 - -
Pral2966g00014 1082 SUPERFAMILY L domain-like 129 417 - -
Pral2966g00014 1082 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 868 1078 - -
Pral2966g00014 1082 Gene3D Ribonuclease Inhibitor 1 151 IPR032675 -
Pral2966g00014 1082 SMART LRR_typ_2 278 301 IPR003591 -
Pral2966g00014 1082 SMART LRR_typ_2 254 277 IPR003591 -
Pral2966g00014 1082 SMART LRR_typ_2 351 375 IPR003591 -
Pral2966g00014 1082 SMART LRR_typ_2 230 253 IPR003591 -
Pral2966g00014 1082 SMART LRR_typ_2 302 326 IPR003591 -
Pral2966g00014 1082 SMART LRR_typ_2 672 697 IPR003591 -
Pral2966g00014 1082 SMART LRR_typ_2 14 38 IPR003591 -
Pral2966g00014 1082 SMART LRR_typ_2 158 181 IPR003591 -
Pral2966g00014 1082 SMART LRR_typ_2 648 671 IPR003591 -
Pral2966g00014 1082 SMART LRR_typ_2 399 421 IPR003591 -
Pral2966g00014 1082 SMART LRR_typ_2 62 85 IPR003591 -
Pral2966g00014 1082 SMART LRR_typ_2 182 206 IPR003591 -
Pral2966g00014 1082 SMART LRR_typ_2 600 624 IPR003591 -
Pral2966g00014 1082 SMART LRR_typ_2 552 575 IPR003591 -
Pral2966g00014 1082 SMART LRR_typ_2 86 110 IPR003591 -
Pral2966g00014 1082 Gene3D Ribonuclease Inhibitor 348 418 IPR032675 -
Pral2966g00014 1082 Gene3D Ribonuclease Inhibitor 248 347 IPR032675 -
Pral2966g00014 1082 Pfam Protein kinase domain 793 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2966g00014 1082 ProSitePatterns Protein kinases ATP-binding region signature. 798 820 IPR017441 GO:0005524
Pral2966g00014 1082 FunFam Leucine-rich repeat receptor protein kinase EMS1 320 417 - -
Pral2966g00014 1082 Pfam Leucine rich repeat 65 123 IPR001611 GO:0005515
Pral2966g00014 1082 Pfam Leucine rich repeat 232 291 IPR001611 GO:0005515
Pral2966g00014 1082 Pfam Leucine rich repeat 625 685 IPR001611 GO:0005515
Pral2966g00014 1082 Pfam Leucine rich repeat 352 412 IPR001611 GO:0005515
Pral2966g00014 1082 Pfam Leucine rich repeat 529 589 IPR001611 GO:0005515
Pral2966g00014 1082 FunFam Serine-threonine protein kinase plant-type 772 867 - -
Pral2966g00014 1082 ProSiteProfiles Leucine-rich repeat profile. 184 206 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2966g00014 Pral-Chr2966 131538 143629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2966g00014 553 691 Receptor kinase-like Gene Family AT3G47570 38.129 4.81e-16 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral2966g00014 Pkinase 6.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2966g00014 - K13420 qsa:O6P43_031966 1059.28