Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2966g00005 ATGTCGACCTTGAAGATTTCAAAGCTGAGAGAGGTTGATGATTCTACTGATAGATGGAGGATTGTGGCTCGTGTCATTAGAAGATGGAATGTGTTTAACAAGGATGCTCCTGATGAGGTCTTCTGTATTTCAATGTTGCTGGTTGATGAGGAGGGGACAAGAATCCAAGCATCGGTCATGAACAAGAGTGTGTTTGATCTTTATGAAGAGAGGCCTTTGGAGGGAAGGATCTACTTCATTGCTAATTTCTCTGTGTCAGCCAACTCAAAGGAGTATAGGGCTACCAACCATCCCTATAAGATTACCCTTGGTGCGCTGACATATATCCAGGAAAAAAATGCACCAATTCCTGAATATTCATATAACTTTTTCCCTATAGCTGAAATCTTGGAGGTGGAACCAAAAAACAACATTGACTATTTGATTGATGTCATTGGCTTTGTCACCTCTATCGGTGCCTTGGAAGAATATCGCGTGAACCATGAAGTCAAGAATAGAGTGCGGCTGACTTTATCTGACAACTTGGAAAATTCAGTTTCATGTGTATTGTTTGATGAATGTGCAACTGAGGTCTGTATGACTGACTTTACAAGGCTGGAAGCTCCCATAGTAATCCTCATTCAGCTAGGGAGAATTGGATTTGATGAGGACGGGAAGCCTGAAGTCTGCAGCTCTTTTCATGCGACTAAGAGGAAGCTAATGCAAGAAATATGTGGTTGTGACAATGCAAAGACATTGCCTTCACCAACAATCAGCACGATCTCTGCAGGCGCTCCATCTCAGGCCGTGAATGCTTCTGAGAGAAGCTTGCTTGCTAATCATCCTTTGATTTCAATTTCTGAGATAGAAAATCGGGGTGTGGAGGACTTTTTCTTAATTAAGTGCACGGTGCTGAAGGTTGACACCAGGCATGGCTGGAATTATCTTGGGTGTGCTAGGTGTGGCAGTAAGTCCAAGACTGAATCCGGGAGGCTGAAGGTTCACTATACAGTTGCTGATGACTCAGGGAAGGCCACGGTGGTCTTCTTTGACAAGCTGGCCTTTCAATTTCTGGGAAAAACTGCTAATGAGATGAAGCTGCAGCTAGAGAAAGAAGATCGAGGGTATGATTTTCCGGATGAATTGGACTGTTTGGTAGGGAAGAGGCTGCTATTGAAGATTAAGCTTAACAAGTACAACATAGACTTCCCACACTCTAGCATCTCAGTCTCTGCATATACTGAGATTGTTAATTTGATGGAGGACTTTAATAGGGCTGGGGAGACAACTGAGGAAGTTCCTGAAGAGGAATCCAATTATGTTCATGTGGAAGAAGAGACCCCTGAGGATAGTGGTGTTGCTGATTCACAACCAGTCAATGATGAGCAGAAGGGGGACGATACTGAAGTGCTTGATGTCATGCCCATATCACAGGCCTACCCTATCGCAACTTATAAAGGGAAGAGAAGGTTACAGCAAGAAAGAGTGCTGGGTTGA 1476 0.437 MSTLKISKLREVDDSTDRWRIVARVIRRWNVFNKDAPDEVFCISMLLVDEEGTRIQASVMNKSVFDLYEERPLEGRIYFIANFSVSANSKEYRATNHPYKITLGALTYIQEKNAPIPEYSYNFFPIAEILEVEPKNNIDYLIDVIGFVTSIGALEEYRVNHEVKNRVRLTLSDNLENSVSCVLFDECATEVCMTDFTRLEAPIVILIQLGRIGFDEDGKPEVCSSFHATKRKLMQEICGCDNAKTLPSPTISTISAGAPSQAVNASERSLLANHPLISISEIENRGVEDFFLIKCTVLKVDTRHGWNYLGCARCGSKSKTESGRLKVHYTVADDSGKATVVFFDKLAFQFLGKTANEMKLQLEKEDRGYDFPDELDCLVGKRLLLKIKLNKYNIDFPHSSISVSAYTEIVNLMEDFNRAGETTEEVPEEESNYVHVEEETPEDSGVADSQPVNDEQKGDDTEVLDVMPISQAYPIATYKGKRRLQQERVLG 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2966g00005 491 SUPERFAMILY Nucleic acid-binding proteins 4 111 IPR012340 -
Pral2966g00005 491 MobiDBLite consensus disorder prediction 420 442 - -
Pral2966g00005 491 Gene3D - 3 111 IPR012340 -
Pral2966g00005 491 Pfam Domain of unknown function DUF223 45 137 IPR003871 -
Pral2966g00005 491 SUPERFAMILY Nucleic acid-binding proteins 120 214 IPR012340 -
Pral2966g00005 491 SUPERFAMILY Nucleic acid-binding proteins 275 394 IPR012340 -
Pral2966g00005 491 CDD RPA1_DBD_A_like 20 101 - -
Pral2966g00005 491 Gene3D - 115 245 IPR012340 -
Pral2966g00005 491 MobiDBLite consensus disorder prediction 420 466 - -
Pral2966g00005 491 Gene3D - 260 418 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2966g00005 Pral-Chr2966 33807 36376 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2966g00005 3 393 Core DNA Replication Machinery Family AT5G08020 24.009 4.96e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2966g00005 - - pcin:129290097 389.423