Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2962g00012 ATGAATCCCTTCTCAGTTTCTCTATTATCAGTTGCAGAAGGGGCTCCTAGAACAAGACCTTCAAGACCTTTCAGTTTTCTTCTCCACATCTTCGTGTGGTTATTGGCCTGTCTCTTTATAACAGGCCATGGTTCTGAGAGTGAAACCTATTGCTTGAAATCCATCAAACAATCAATTGATCCGTTCAATTATTTATCTGACTGGGATTTCAACAGAAACTCCAATGGCTACTACTTTTGCGTATTCTCTGGTGTTGAATGCTTGGACATCGATGAACAGAGAGTAGTATCAAGTCTCAGTCTTGCTAATATGGGGCTGAAGGGACCATTCCCTCGCGGTATTGAAAATTGTTCAGCACTGCAGGAGCTTGACCTTTCCTTCAACGAGATTTCAGGTGAAATTCCGAAGGTTGTTGCAAACCTATATTCGCTGATCACACTTAAACTTGATGGCAACCAGTTATCTGGTGAAATCCCTCATGAAATTGGGTTGCTTCCTCAAATAGAATCTTTTAATGTTGCTAACAATTTGTTGTCTGGGGAAGTTCCTGTCTTTACCAGAAGTCCTCACGTTAGTTTGAGTTATGCCAATAATAGTGGCCTTTGTGGGTATACTCTAGAACCCTGTGATGACAGACCTTCTGATAGATCATTTTGGTACAGTTTTGCTATTGCTTATGTTTGTTCAACAACCTCTGTCATAGTTTCTTTCATGTACTATTTTCAACCTTGGAGAGTCTTGAAGAAAAGGGGGAGAAATTCCATAACTTCTTTGAGAAGAAAGAGACAGAACATTATTCAAACTCGTACTACAGAAGTTGCTGAGTTGCTGCCATTGGCGTTGCAAGAACAAGGAATCAAAGAGCTCCCAGCGTTGTTGGAGAGGTTGATTCCTAGAATAAACTTTGGGGAACTATGTGAGGCAACTAATTACTTCAGCACAGACAATGCCTTAGGATTTGGAAGGACAGGGATTGTGTACAAGGCCAAGCTTCCAAATAACTATTTCATGGCGGTTAAAAGACTCTATGATTCTCAACTGTACAAGAGAGAGTTCTTGCTGGAAACGATGATCCCAGGAAAACACAGACACCACAACATAGTCCCTCTTCTAGGATTTTGTATGGACAAAAAGGAAAGGCTTCTGGTTTATGAATACATGTCAAATGGAAAACTCCAAGATTGGCTACAATCTGATGGATCTCAATCTATGGTATTAGAATGGCCTGTGAGGCTTTATATAGCTCTTGGGCTAGCCAGAGGCTTGTCCTGGCTTCACAATAAGTGCAACATTGTCCATCTCAATCTGAGTTCTGAGTGTGTTCTTCTCAGCAAAGACTTCGAACCCAAAATTTCAAACTTTGGCGAGGCCAAATTCATCAATCAGATCATGAACGATCATTTGAGGAGGAAGCTGTATATGATAAATGGACTTGCTGAGAAGGGTTCTACGGAGAAGGATGTGTACAGCTTTGGATTAACTCTTTTTGAGCTCATAACAGGGAAAAGATTGAATCCAACCACTGATTCTTCTGACACTGTTGGTTTCAGCTCTTTGATGAAATTAATCAGTACTAAATTGTTCACTGGCCCTTGTGATTTTTACAGTGTCATTGATAAATTTCTCATTGGGAAAGGATTTGATGAGAAAATCTTTGGTCTAATTGAAGTTGCATGTGATTGTGTTAAGCCTTCTCTGGTGCAGAGGCCAAAGATGGATGATGCGTACAGAAGAATAAGAGCTTTGTGGGAGGGCTATGGACCCACGTCTGATCATTCTGCAAGTCTAAAGCCTTCTCGGGTTTGCCCTGTGGAGGTATCATGTGGAAATGAAATTGAGTGCCTTCACTGA 1851 0.4095 MNPFSVSLLSVAEGAPRTRPSRPFSFLLHIFVWLLACLFITGHGSESETYCLKSIKQSIDPFNYLSDWDFNRNSNGYYFCVFSGVECLDIDEQRVVSSLSLANMGLKGPFPRGIENCSALQELDLSFNEISGEIPKVVANLYSLITLKLDGNQLSGEIPHEIGLLPQIESFNVANNLLSGEVPVFTRSPHVSLSYANNSGLCGYTLEPCDDRPSDRSFWYSFAIAYVCSTTSVIVSFMYYFQPWRVLKKRGRNSITSLRRKRQNIIQTRTTEVAELLPLALQEQGIKELPALLERLIPRINFGELCEATNYFSTDNALGFGRTGIVYKAKLPNNYFMAVKRLYDSQLYKREFLLETMIPGKHRHHNIVPLLGFCMDKKERLLVYEYMSNGKLQDWLQSDGSQSMVLEWPVRLYIALGLARGLSWLHNKCNIVHLNLSSECVLLSKDFEPKISNFGEAKFINQIMNDHLRRKLYMINGLAEKGSTEKDVYSFGLTLFELITGKRLNPTTDSSDTVGFSSLMKLISTKLFTGPCDFYSVIDKFLIGKGFDEKIFGLIEVACDCVKPSLVQRPKMDDAYRRIRALWEGYGPTSDHSASLKPSRVCPVEVSCGNEIECLH 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2962g00012 616 Gene3D Ribonuclease Inhibitor 47 205 IPR032675 -
Pral2962g00012 616 Pfam Protein kinase domain 313 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2962g00012 616 Gene3D Phosphorylase Kinase; domain 1 279 386 - -
Pral2962g00012 616 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 98 581 IPR046959 -
Pral2962g00012 616 ProSiteProfiles Protein kinase domain profile. 312 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2962g00012 616 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 88 182 - -
Pral2962g00012 616 SUPERFAMILY L domain-like 47 197 - -
Pral2962g00012 616 Pfam Leucine rich repeat N-terminal domain 46 87 IPR013210 -
Pral2962g00012 616 SUPERFAMILY Protein kinase-like (PK-like) 295 577 IPR011009 -
Pral2962g00012 616 Gene3D Transferase(Phosphotransferase) domain 1 387 591 - -
Pral2962g00012 616 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2962g00012 Pral-Chr2962 38665 41108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2962g00012 21 587 Receptor kinase-like Gene Family AT3G28450 32.190 5.20e-84 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pral2962g00012 Pkinase 1.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2962g00012 - - pcin:129299364 940.258