Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2960g00003 ATGTCGCCGGCAGCCGGAATGCACGTCCCTCTCTTGCCAGAAGGCAAAGTTTTAGTAAAGCCAGCCTCCGTCTCTGGCGCGGTCTTCAATGTGGCTACCAGTATAATTGGCGCCGGGATCATGTCGATTCCGGCGACCTTGAAGGTTCTGGGTGTAATCCCGGCCTTCGTGATGATCCTGGTCATCGGTCTCCTTGCCGAAGTTTCAGTGGACTTCCTCATGAGGTTTTCGCATTCCGGCAACACCACCACTTATGCTGGAGTGATGAGGGAGGCTTTCGGGCCGGCCGGAGCATTTGCCGCGCAAATTTGTGTAATGATCACAAATCTTGGGTGTTTAATTATGTACCTCATTATCATCGGGGATGTGCTATCTGGAAATTCACCTGGAGGCGAGGTTCACTTGGGGATTCTGCAACAATGGTTAGGAATTCACTGGTGGACTTCACGGGAGTTTGCTCTGCTCGTGATAGTCTTCGTCATGCTTCCATTGGTCCTGTATCGTCGTCTGGAGTCCTTAAGGTTCAGTTCTGCAATATCAACTCTTCTAGCAGTGGCGTTCGTGGGCATATGTTCTGGGATGGCAATCACTGCTCTGATGGCAGGAAAAACATATCGTCCGAGACTGCTCCCCGAGTTAAACAGCCACACCTCTTTTTTTGATCTATTCACAGCTGTTCCAGTCATAGTCACTGCCTTCACCTTTCACTTCAACGTGCATCCAATTGGGTTTGAACTTGCCCAGCCATCTGATATGACAGTAGCAGTTCGAATAGCATTAGTTTTATGTGGCGCCATATACTTTGCGATAGGCCTATTTGGGTACCTTCTATTTGGGGATTCAACACAATCAGACATACTCATAAACTTTGATCAGAATACTGCTGGTTCTGCGACTGGGTCCTTGCTCAATACCCTAGTCCGTTTAAGCTATGCCTTTCATATCATGTTGGTGTTTCCTCTCTTGAACTTCTCTCTGAGAGCCAACATAGACGAGCTTCTCTTCCCCAAGAAGCCTCTGCTTGCCACAGACAACAAAAGATTTGTGATCCTCACTCTGGTTCTCCTCGTCTTCAGCTACCTCATCGCCATCGCTTTCCCTGATATTTGGTACTTCTTTCAGTTCGTGGGATCAACTTCCGCAGTGTGCCTCGCCTTCATCTTTCCTGGTTCTCTCGCTCTTAGGGATGCTCATGGTATATCGAAAAGAAACGACAAGATCACAGCACTGATAATGATCATCCTGGCTATAATAACAAGTGTCATTGCCATTTCCACCAACATATACAACTTTTTCAGCAGCAAATCATAG 1311 0.4752 MSPAAGMHVPLLPEGKVLVKPASVSGAVFNVATSIIGAGIMSIPATLKVLGVIPAFVMILVIGLLAEVSVDFLMRFSHSGNTTTYAGVMREAFGPAGAFAAQICVMITNLGCLIMYLIIIGDVLSGNSPGGEVHLGILQQWLGIHWWTSREFALLVIVFVMLPLVLYRRLESLRFSSAISTLLAVAFVGICSGMAITALMAGKTYRPRLLPELNSHTSFFDLFTAVPVIVTAFTFHFNVHPIGFELAQPSDMTVAVRIALVLCGAIYFAIGLFGYLLFGDSTQSDILINFDQNTAGSATGSLLNTLVRLSYAFHIMLVFPLLNFSLRANIDELLFPKKPLLATDNKRFVILTLVLLVFSYLIAIAFPDIWYFFQFVGSTSAVCLAFIFPGSLALRDAHGISKRNDKITALIMIILAIITSVIAISTNIYNFFSSKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2960g00003 436 PANTHER AMINO ACID TRANSPORTER 20 419 - -
Pral2960g00003 436 Pfam Transmembrane amino acid transporter protein 21 423 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2960g00003 Pral-Chr2960 8726 10851 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2960g00003 1 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.908 1.71e-178 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2960g00003 - - qsa:O6P43_020133 670.233