Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2959g00006 ATGGCGATGGAGGATAACGAGAGCCGAGCCAGCGGAGTGCAGGAAACATCGTCGTCCCCCGCTCAAAACCGGCAACAGAGACAAAAACTTGAAGTGTACAATGAGGTTCTTCGTCGCCTCAAGGATTCCAGCAACGACGAGGCTATGCAGCCTGGCTTCCACCATCGGCTCTGGGCTCATTTCAACCGCCTTCCGACACGTTATGCGTTGGATGTGAATGTGGAAAGGGCTGCCGATGTTCTGATGCACAAGAGATTACTGCATTTGGCACATGATCCTGCTAATAGACCTGCGATTGAAGTTCGGCTGGTCCAGGTTCAACCCATATCTGACGGGAACTTAGCTGATTCTGTCCATTCAGAAGCTCCTGGTAAAGAAGCCGGTCAAATATCTTCAAAGCACTCAGGGAGACAGAGTATACATCCACCTCCTGCTTTTGGTTCTTCTCCAAACCTTGAAGCCCTGGCACTTGAAGCAAATAAGAACGAAGATCTAGAGGTGGAACACTCTGTACATGCTGGTGAACAATATTCTCGGCCCATGCATGAAATCACCTTCTCAACAGAAGACAAGCCAAAGCTCCTCAGTCAGTTAACTTCTTTGCTTTCTGATATTGGACTGAACATTCAAGAGGCACATGTTTTTTCCACAACCGATGGTTACTCATTAGATGTGTTTGTTGTTGATGGATGGCCCTATGAGGAAACAGAACAGCTTAAAGCAGTCTTGGAGAAAGAAATTTTGTTGATTGAGAGGCAGGCATGGCCCATTCAACAATCAGTTTCTTCTGTTGGTGAGCCTGATCAAGTTGTGAAATGTGAACCTGATCATTTGACAATACCTAATGATGGGACGGATGTTTGGGAAATAGATCCTAAACATTTAAAATTTGGAAGTAAAATTGCATCGGGATCATATGGTGATCTATTTAAAGGTACCTATTGTAGTCAGGAAGTGGCGATTAAAGTTCTCAAAGCTGAGCATGTAAATTCAGATTTACAAAGGGAGTTTGGCCAGGAAGTCTTCATCATGAGAAAGGTTCGGCATAAGAATGTTGTGCAATTTATAGGAGCATGTACCAAGCCCCCATATTTGTGCATAGTAACAGAATTTATGTCTGGTGGAAGTGTGTATGACTACTTACATAAGCAAAAGGGTGTTTTTAAATTTCCATCCCTTCTCAAAGTAGCAATTGATGTTTCCAAGGGAATGAATTACTTGCACCAAAATAACATTATCCACAGAGACTTGAAGGCTGCAAATCTTTTGATGGATGAAAATTGTGTGGTCAAGGTTGCTGATTTTGGGGTTGCTAGAGTGAAAGCCCAATCTGGAGTTATGACGGCAGAAACTGGAACATATCGTTGGATGGCTCCCGAGTGGCGAGAAGCTTTATGA 1398 0.4378 MAMEDNESRASGVQETSSSPAQNRQQRQKLEVYNEVLRRLKDSSNDEAMQPGFHHRLWAHFNRLPTRYALDVNVERAADVLMHKRLLHLAHDPANRPAIEVRLVQVQPISDGNLADSVHSEAPGKEAGQISSKHSGRQSIHPPPAFGSSPNLEALALEANKNEDLEVEHSVHAGEQYSRPMHEITFSTEDKPKLLSQLTSLLSDIGLNIQEAHVFSTTDGYSLDVFVVDGWPYEETEQLKAVLEKEILLIERQAWPIQQSVSSVGEPDQVVKCEPDHLTIPNDGTDVWEIDPKHLKFGSKIASGSYGDLFKGTYCSQEVAIKVLKAEHVNSDLQREFGQEVFIMRKVRHKNVVQFIGACTKPPYLCIVTEFMSGGSVYDYLHKQKGVFKFPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENCVVKVADFGVARVKAQSGVMTAETGTYRWMAPEWREAL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2959g00006 465 MobiDBLite consensus disorder prediction 114 150 - -
Pral2959g00006 465 SUPERFAMILY ACT-like 181 245 IPR045865 -
Pral2959g00006 465 Coils Coil 23 43 - -
Pral2959g00006 465 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 131 460 - -
Pral2959g00006 465 ProSiteProfiles Protein kinase domain profile. 295 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2959g00006 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Pral2959g00006 465 Pfam Protein tyrosine and serine/threonine kinase 295 461 IPR001245 GO:0004672|GO:0006468
Pral2959g00006 465 Gene3D Transferase(Phosphotransferase) domain 1 374 463 - -
Pral2959g00006 465 Coils Coil 233 253 - -
Pral2959g00006 465 CDD STKc_MAP3K-like 301 460 - -
Pral2959g00006 465 MobiDBLite consensus disorder prediction 1 29 - -
Pral2959g00006 465 FunFam Serine/threonine-protein kinase isoform 1 285 373 - -
Pral2959g00006 465 MobiDBLite consensus disorder prediction 131 145 - -
Pral2959g00006 465 SUPERFAMILY Protein kinase-like (PK-like) 281 461 IPR011009 -
Pral2959g00006 465 ProSiteProfiles ACT domain profile. 183 262 IPR002912 -
Pral2959g00006 465 SMART serkin_6 295 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2959g00006 465 Gene3D Phosphorylase Kinase; domain 1 285 373 - -
Pral2959g00006 465 MobiDBLite consensus disorder prediction 9 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2959g00006 Pral-Chr2959 43518 49550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2959g00006 1 460 MAP Kinase Kinase Kinase AT4G38470 71.613 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral2959g00006 PK_Tyr_Ser-Thr 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2959g00006 - - gmx:100805180 754.592