Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2959g00004 ATGGCGATGGAGGATAACGAGAGCCGAGCCAGCGGAGTGCAGGAAACATCGTCGTCCCCCGCTCAAAACCGGCAACAGAGACAAAAACTTGAAGTGTACAATGAGGTTCTTCGTCGCCTCAAGGATTCCAGCAACGACGAGGCTATGCAGCCTGGCTTCCACCATCGGCTCTGGGCTCATTTCAACCGCCTTCCGACACGTTATGCGTTGGATGTGAATGTGGAAAGGGCTGCCGATGTTCTGATGCACAAGAGATTACTGCATTTGGCACATGATCCTGCTAATAGACCTGCGATTGAAGTTCGGCTGGTCCAGGTTCAACCCATATCTGACGGGAACTTAGCTGATTCTGTCCATTCAGAAGCTCCTGGTAAAGAAGCCGGTCAAATATCTTCAAAGCACTCAGGGAGACAGAGTATACATCCACCTCCTGCTTTTGGTTCTTCTCCAAACCTTGAAGCCCTGGCACTTGAAGCAAATAAGAACGAAGATCTAGAGGTGGAACACTCTGTACATGCTGGTGAACAATATTCTCGGCCCATGCATGAAATCACCTTCTCAACAGAAGACAAGCCAAAGCTCCTCAGTCAGTTAACTTCTTTGCTTTCTGATATTGGACTGAACATTCAAGAGGCACATGTTTTTTCCACAACCGATGGTTACTCATTAGATGTGTTTGTTGTTGATGGATGGCCCTATGAGGAAACAGAACAGCTTAAAGCAGTCTTGGAGAAAGAAATTTTGTTGATTGAGAGGCAGGCATGGCCCATTCAACAATCAGTTTCTTCTGTTGGTGAGCCTGATCAAGTTGTGAAATGTGAACCTGATCATTTGACAATACCTAATGATGGGACGGATGTTTGGGAAATAGATCCTAAACATTTAAAATTTGGAAGTAAAATTGCATCGGGATCATATGGTGATCTATTTAAAGGTACCTATTGTAGTCAGGAAGTGGCGATTAAAGTTCTCAAAGCTGAGCATGTAAATTCAGATTTACAAAGGGAGTTTGGCCAGGAAGTCTTCATCATGAGAAAGGTTCGGCATAAGAATGTTGTGCAATTTATAGGAGCATGTACCAAGCCCCCATATTTGTGCATAGTAACAGAATTTATGTCTGGTGGAAGTGTGTATGACTACTTACATAAGCAAAAGGGTGTTTTTAAATTTCCATCCCTTCTCAAAGTAGCAATTGATGTTTCCAAGGGAATGAATTACTTGCACCAAAATAACATTATCCACAGAGACTTGAAGGCTGCAAATCTTTTGATGGATGAAAATTGTGTGGTCAAGGTTGCTGATTTTGGGGTTGCTAGAGTGAAAGCCCAATCTGGAGTTATGACGGCAGAAACTGGAACATATCGTTGGATGGCTCCCGAGCTTCCGTATGAGAATTTGACCCCCCTACAGGCAGCTATAGGAGTGGTCCAAAAGGGTCTACGACCCATCATCCCAAAGAATACCCATCCAAAATTTGTTGAGCTTCTTGAGAGATGTTGGCAGCAAGATCCAACACTACGACCTGATTTCTCTGAAATTATAGACATTCTGCGACAGTTGGCTAAAGAGGTCGGAGATGGAGAGGATCCACGCAAGGAAAAATCTGGAGGATTTTTCTCTGTCCTCAGACGAGGTCATCACTGA 1644 0.4416 MAMEDNESRASGVQETSSSPAQNRQQRQKLEVYNEVLRRLKDSSNDEAMQPGFHHRLWAHFNRLPTRYALDVNVERAADVLMHKRLLHLAHDPANRPAIEVRLVQVQPISDGNLADSVHSEAPGKEAGQISSKHSGRQSIHPPPAFGSSPNLEALALEANKNEDLEVEHSVHAGEQYSRPMHEITFSTEDKPKLLSQLTSLLSDIGLNIQEAHVFSTTDGYSLDVFVVDGWPYEETEQLKAVLEKEILLIERQAWPIQQSVSSVGEPDQVVKCEPDHLTIPNDGTDVWEIDPKHLKFGSKIASGSYGDLFKGTYCSQEVAIKVLKAEHVNSDLQREFGQEVFIMRKVRHKNVVQFIGACTKPPYLCIVTEFMSGGSVYDYLHKQKGVFKFPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENCVVKVADFGVARVKAQSGVMTAETGTYRWMAPELPYENLTPLQAAIGVVQKGLRPIIPKNTHPKFVELLERCWQQDPTLRPDFSEIIDILRQLAKEVGDGEDPRKEKSGGFFSVLRRGHH 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2959g00004 547 MobiDBLite consensus disorder prediction 114 150 - -
Pral2959g00004 547 Pfam Protein tyrosine and serine/threonine kinase 295 461 IPR001245 GO:0004672|GO:0006468
Pral2959g00004 547 Pfam Protein tyrosine and serine/threonine kinase 462 516 IPR001245 GO:0004672|GO:0006468
Pral2959g00004 547 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 131 522 - -
Pral2959g00004 547 SUPERFAMILY ACT-like 181 245 IPR045865 -
Pral2959g00004 547 MobiDBLite consensus disorder prediction 525 540 - -
Pral2959g00004 547 CDD STKc_MAP3K-like 301 517 - -
Pral2959g00004 547 Gene3D Transferase(Phosphotransferase) domain 1 464 535 - -
Pral2959g00004 547 Coils Coil 23 43 - -
Pral2959g00004 547 SMART serkin_6 295 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2959g00004 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Pral2959g00004 547 ProSiteProfiles Protein kinase domain profile. 295 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2959g00004 547 Coils Coil 233 253 - -
Pral2959g00004 547 SUPERFAMILY Protein kinase-like (PK-like) 281 517 IPR011009 -
Pral2959g00004 547 MobiDBLite consensus disorder prediction 1 29 - -
Pral2959g00004 547 Gene3D Transferase(Phosphotransferase) domain 1 373 463 - -
Pral2959g00004 547 FunFam Serine/threonine-protein kinase isoform 1 285 373 - -
Pral2959g00004 547 Gene3D Phosphorylase Kinase; domain 1 285 372 - -
Pral2959g00004 547 MobiDBLite consensus disorder prediction 131 145 - -
Pral2959g00004 547 MobiDBLite consensus disorder prediction 525 547 - -
Pral2959g00004 547 ProSiteProfiles ACT domain profile. 183 262 IPR002912 -
Pral2959g00004 547 MobiDBLite consensus disorder prediction 9 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2959g00004 Pral-Chr2959 42247 49550 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2959g00004 8 546 MAP Kinase Kinase Kinase AT4G35780 61.837 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral2959g00004 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2959g00004 - - gmx:100805180 893.649