Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2956g00008 ATGTTGATGAACATCGACAGCCACACCCAAGCTGGCCCCGGTGGCGAGATCTTCACCGAGCCCATGGAAGTTCTGAAGGCCACTTATAGCATTGGAAATGAGATAGGGCGAGGCCAAACTGGGCCTACGTATATATGTACACACAAGTTAACAGGCGAACCATTTGCATGCAAAACCATAGCCAAGACGAAGCTCAAGAACAAAGATGATATAGAGGATGAAGTTACTAACGTCCAAATCATGCAACATTTGGCTGGCCAGCCTAATATTGTGGAGCTCAAAGGCTTGTATGAGGACTCACAATCGATTCGTGTCGTCAAGGAGCTCTGCGCCGGCGGTGAGATCCTCGATCGGATCATTGCCAACGGCTACCACAGTGAGCGAGCTGCGGCGGCGCTGTTACGGGACATAGTTCAAGCCATCCATACTTGCCACTCCATGGGTGTCATCCATAGAGATATATGCCTTGAGCATTTTCTCTTTCTTAATGACGAGGCCAGTTCTCCCCTCAAACTCGTTGATTTCACTCTTTCTTCTTTTTACCAACAAGGAGAGGTGTTTGACTTGGTCGCTGGGAGTGCGTGTTACGTGGCACCTGAGGTGTTGAAGAGGGAATATGGGCCAGAAATTGACATTTGGAGTGCTGGGGTCATCCTTTACACTCTTCTTTGTGGTGTTCATCCATTTTGGCCAGCACATGCAAATGGGATATTCGATGATATCGAAAGAGGCGAATATGACTTGTCAAGGGATCCATGGCCAACCATATCTCCTTCAGCAAAAGACCTTCTCACTAAAATGTTGAATTCAGATCCCAACCACAGGCTCACAGCCGATCAAGTCTTGAATCATCCATGGATCAAGGAAGATGGAGAAGCACCGGATCAACCTCTTGACGATATTGTGATGAATAGGTTTAAGCTCTTGAAAGCATTTAGGTTCTTCCATTGGAGTAGTCTGTAA 963 0.4704 MLMNIDSHTQAGPGGEIFTEPMEVLKATYSIGNEIGRGQTGPTYICTHKLTGEPFACKTIAKTKLKNKDDIEDEVTNVQIMQHLAGQPNIVELKGLYEDSQSIRVVKELCAGGEILDRIIANGYHSERAAAALLRDIVQAIHTCHSMGVIHRDICLEHFLFLNDEASSPLKLVDFTLSSFYQQGEVFDLVAGSACYVAPEVLKREYGPEIDIWSAGVILYTLLCGVHPFWPAHANGIFDDIERGEYDLSRDPWPTISPSAKDLLTKMLNSDPNHRLTADQVLNHPWIKEDGEAPDQPLDDIVMNRFKLLKAFRFFHWSSL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2956g00008 320 Pfam Protein kinase domain 29 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2956g00008 320 FunFam Maternal embryonic leucine zipper kinase 20 304 - -
Pral2956g00008 320 ProSiteProfiles Protein kinase domain profile. 29 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2956g00008 320 SUPERFAMILY Protein kinase-like (PK-like) 19 302 IPR011009 -
Pral2956g00008 320 CDD STKc_CAMK 29 286 - -
Pral2956g00008 320 Gene3D Phosphorylase Kinase; domain 1 31 115 - -
Pral2956g00008 320 Gene3D Transferase(Phosphotransferase) domain 1 116 314 - -
Pral2956g00008 320 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2956g00008 Pral-Chr2956 67760 70918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2956g00008 9 320 EF-hand Containing Proteins AT5G12180 66.026 3.77e-150 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral2956g00008 Pkinase 4.9e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2956g00008 K13412 - ath:AT5G12180 419.468