Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2956g00007 | ATGGGCAACTGTTGCTCCGGCAAGGGCAGCGATGCCCCGGTCACCGACAACAACAAGGGAGGAGAAGCAAACGCCGACAACCAACAGAACAATGCATCAACAGGAGGAGGTGGAAACAACCCCGGGACATCCACCCCTACCAAACCTCCGTCCTCCAAGCCTTCTCCGACACCGTCCCCTCCTCGGGCGAAAAAGGCCACCCCGATCGGCACCGTCCTTGGCCGGCCCATGGAGGACGTGAAGGCCACGTATAGCATTGGAAAGGAGCTAGGACGAGGACAATTCGGAGTCACACATTTATGTACAAATAAAGCAACGGGCCAGCAATTTGCATGCAAAACCATAGCCAAAAGGAAGCTTGCGAGCAAAGATGACATAGAAGATGTACGTAGGGAGGTTCAAATCATGCACCATTTGGCTGGTCAGCCTAATATTGTGGAACTCAAAGGTGCGTACGAAGATAAACAATCGGTTCATCTCGTCATGGAGCTCTGCGCCGGGGGCGAGCTCTTCGACCGGATCATCGCCAGAGGTCATTACACCGAGCGAGCCGCCGCGTCCTTGTTGAGAACCATAGTGCAGATCGTCCATACTTGCCATTCCATGGGCGTCATACATAGAGATCTTAAGCCTGAGAATTTCCTCTTGCTTAATAAGGACGAGAATTCTCCCCTCAAAGCCACCGATTTCGGTTTATCCGTTTTTTACAAGCAAGGAGAGGTATTTAAAGACGTTGTTGGGAGTGCATATTATATAGCACCAGAAGTATTGAGGAGGAAATACGGGCCAGAAGCTGATATCTGGAGTGTTGGTGTTATGCTTTACATTCTTCTTTGTGGTATTCCTCCATTTTGGGCAGAATCTGAAAATGGAATATTCAATGCAATATTACGAGGGCATGTTGATTTTACAACCGATCCATGGCCAAGCATATCTGCTTCAGCAAAAGATCTCATCAGAAAAATGTTGAATTCAGATCCCAGGCAGAGGCTCACAGCCTATCAAGTCTTGAATCATCCATGGATAAAGGAGGATGGAGAAGCACCAGATACGCCTCTTGATAATGCTGTGCTCAACAGACTCAAGCAATTCAGAGCGATGAATCAATTCAAGAAAGTTGCTCTAAAGGTAATTGCTGGGTGCTTATCAGAGGAAGAAATCATGGGGTTAAAGAAAATGTTCAAAGGAATGGACACTGACAATAGTGGAACCATAACCATTGAAGAGCTCAAGCAAGGGCTTGCAAAGCAGGGCACAAAACTAAGTGAACAAGAAGTCAAGCAATTATTAGAAGCTGCTGATGCTGATGGCAATGGAACCATAGATTATGACGAGTTCATTACAGCAACATTGCATTTGAACCGAATCAACAAAGAAGAACATCTTTATACTGCTTTCCAATACTTTGATAAAGACAATAGCGGGTTCATTACGGTTGAAGAACTAGAGCAGGCACTCCGAGAATATAACATGCATGATGGTAGGGACATCAACGAAATATTATCAGAAGTCGATTCCGATAATGATGGTCGGATCAACTATGAGGAGTTCTCGGCAATGATGAGGAAAGGAGCTCCGGAAGCCCAAACCAGGAAGAGACGTACGGAGTCATTTGTTTAA | 1620 | 0.4617 | MGNCCSGKGSDAPVTDNNKGGEANADNQQNNASTGGGGNNPGTSTPTKPPSSKPSPTPSPPRAKKATPIGTVLGRPMEDVKATYSIGKELGRGQFGVTHLCTNKATGQQFACKTIAKRKLASKDDIEDVRREVQIMHHLAGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIARGHYTERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDVVGSAYYIAPEVLRRKYGPEADIWSVGVMLYILLCGIPPFWAESENGIFNAILRGHVDFTTDPWPSISASAKDLIRKMLNSDPRQRLTAYQVLNHPWIKEDGEAPDTPLDNAVLNRLKQFRAMNQFKKVALKVIAGCLSEEEIMGLKKMFKGMDTDNSGTITIEELKQGLAKQGTKLSEQEVKQLLEAADADGNGTIDYDEFITATLHLNRINKEEHLYTAFQYFDKDNSGFITVEELEQALREYNMHDGRDINEILSEVDSDNDGRINYEEFSAMMRKGAPEAQTRKRRTESFV | 539 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2956g00007 | 539 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 204 | 216 | IPR008271 | GO:0004672|GO:0006468 | |
Pral2956g00007 | 539 | ProSitePatterns | EF-hand calcium-binding domain. | 505 | 517 | IPR018247 | - | |
Pral2956g00007 | 539 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 457 | 492 | IPR002048 | GO:0005509 | |
Pral2956g00007 | 539 | MobiDBLite | consensus disorder prediction | 47 | 63 | - | - | |
Pral2956g00007 | 539 | Pfam | Protein kinase domain | 84 | 342 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral2956g00007 | 539 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 385 | 420 | IPR002048 | GO:0005509 | |
Pral2956g00007 | 539 | FunFam | Calcium-dependent protein kinase 1 | 350 | 525 | - | - | |
Pral2956g00007 | 539 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 78 | 517 | - | - | |
Pral2956g00007 | 539 | ProSitePatterns | EF-hand calcium-binding domain. | 434 | 446 | IPR018247 | - | |
Pral2956g00007 | 539 | ProSitePatterns | EF-hand calcium-binding domain. | 470 | 482 | IPR018247 | - | |
Pral2956g00007 | 539 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Pral2956g00007 | 539 | Pfam | EF-hand domain pair | 459 | 522 | IPR002048 | GO:0005509 | |
Pral2956g00007 | 539 | Pfam | EF-hand domain pair | 390 | 450 | IPR002048 | GO:0005509 | |
Pral2956g00007 | 539 | Gene3D | - | 350 | 525 | - | - | |
Pral2956g00007 | 539 | SMART | efh_1 | 389 | 417 | IPR002048 | GO:0005509 | |
Pral2956g00007 | 539 | SMART | efh_1 | 425 | 453 | IPR002048 | GO:0005509 | |
Pral2956g00007 | 539 | SMART | efh_1 | 496 | 524 | IPR002048 | GO:0005509 | |
Pral2956g00007 | 539 | SMART | efh_1 | 461 | 489 | IPR002048 | GO:0005509 | |
Pral2956g00007 | 539 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 496 | 527 | IPR002048 | GO:0005509 | |
Pral2956g00007 | 539 | SMART | serkin_6 | 84 | 342 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral2956g00007 | 539 | SUPERFAMILY | EF-hand | 382 | 522 | IPR011992 | - | |
Pral2956g00007 | 539 | SUPERFAMILY | Protein kinase-like (PK-like) | 68 | 368 | IPR011009 | - | |
Pral2956g00007 | 539 | MobiDBLite | consensus disorder prediction | 20 | 46 | - | - | |
Pral2956g00007 | 539 | ProSitePatterns | Protein kinases ATP-binding region signature. | 90 | 117 | IPR017441 | GO:0005524 | |
Pral2956g00007 | 539 | ProSiteProfiles | Protein kinase domain profile. | 84 | 342 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral2956g00007 | 539 | FunFam | Calcium-dependent protein kinase 1 | 86 | 169 | - | - | |
Pral2956g00007 | 539 | Gene3D | Phosphorylase Kinase; domain 1 | 86 | 169 | - | - | |
Pral2956g00007 | 539 | CDD | STKc_CAMK | 84 | 341 | - | - | |
Pral2956g00007 | 539 | Gene3D | Transferase(Phosphotransferase) domain 1 | 170 | 349 | - | - | |
Pral2956g00007 | 539 | ProSitePatterns | EF-hand calcium-binding domain. | 398 | 410 | IPR018247 | - | |
Pral2956g00007 | 539 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 421 | 456 | IPR002048 | GO:0005509 | |
Pral2956g00007 | 539 | FunFam | calcium-dependent protein kinase 1 | 170 | 349 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2956g00007 | Pral-Chr2956 | 61944 | 66224 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2956g00007 | 1 | 538 | EF-hand Containing Proteins | AT5G12180 | 79.554 | 0.0 | 906 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Pral2956g00007 | Pkinase | 8.2e-76 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2956g00007 | K13412 | - | gmx:100781355 | 884.789 |