Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2948g00002 ATGGAGAAGCTCCCCAGCTTTGTCGTCAGTGGAGGCGTCAAGCTTCCCATTGGCTACCGTTTCTGTCCCACCGATGAAGAGCTTGTCATTCACTACCTCAAGAGGAAGGTCTTCTCTCACCCCTTACCCGCCTCCGTCATTCCCGACTTCGACGTCTTCGCCGCCCACCCTTCCCGCCTCCCAGGTGTCGGTGATTCCAAGGAAAAGAGATATTTCTTTAGCCATAGAAGGGAGCATATTCACAAGAGGCCTGCTGCTTCTGGGTACTGGAAAACCATAGGCAATGACAAGCAAATTATTGCTTCTGAGAACAACCGAGTGGTTGGGATGAGGAAGACTTTGGTTTTCTGTGAAGCCAAACGTTCCCGTGAGGCTCGTACTCGGTGGGTCATGCATGAATTGCGCCTTCTTCCTTCTGAAACACCTTCCTACCCATCACACCAGGTGGCAGCAGCAGATTGGGCTGTGTATCGCATATTTCAAAAGAGGAAGCTTAAGAGAAGAGGATCTAATGGTCAACTCTCTAATATGAGGAAAGTTCAGGGATTAGAGGAAGAGATCAAACCCAGTTTCATAGATTTCACAGCGGAATGTGGGAGTGACACAGGACCTCCCCCACCTAGTTCTCCATGTTCAAGCGAAAGCAGTGAAATCGCTTCTAACAAGCTAGATTAG 675 0.4933 MEKLPSFVVSGGVKLPIGYRFCPTDEELVIHYLKRKVFSHPLPASVIPDFDVFAAHPSRLPGVGDSKEKRYFFSHRREHIHKRPAASGYWKTIGNDKQIIASENNRVVGMRKTLVFCEAKRSREARTRWVMHELRLLPSETPSYPSHQVAAADWAVYRIFQKRKLKRRGSNGQLSNMRKVQGLEEEIKPSFIDFTAECGSDTGPPPPSSPCSSESSEIASNKLD 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2948g00002 224 Gene3D NAC domain 24 166 IPR036093 GO:0003677|GO:0006355
Pral2948g00002 224 PANTHER NAC TRANSCRIPTION FACTOR 56 15 176 - -
Pral2948g00002 224 ProSiteProfiles NAC domain profile. 15 162 IPR003441 GO:0003677|GO:0006355
Pral2948g00002 224 MobiDBLite consensus disorder prediction 195 224 - -
Pral2948g00002 224 Pfam No apical meristem (NAM) protein 16 136 IPR003441 GO:0003677|GO:0006355
Pral2948g00002 224 SUPERFAMILY NAC domain 10 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2948g00002 Pral-Chr2948 22936 24314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2948g00002 7 171 NAC Transcription Factor Family AT5G13180 47.059 9.96e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral2948g00002 NAM 5.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2948g00002 - - qsu:111996957 233.032