Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2945g00005 ATGGAAAGCTTCAGAAAGCTTTCTGTGTGTTTTTTGTTACTATGCTTCACAAGCATGTCCTCCACGCTGGACATGATAACCCCAGACCAACCCCTGCGTGATGGCCAGAATAAAAGTCTGGTTTCAGATAGGGGAATCTTCGAAGCTGGATTCTTCAACCTTGCAAATTCAAAAAGCCGTTACGTGGGAATTTGGTACAAAGACATTCGCGAAAAAACGATCGTATGGGTGGCCAACAGAGAAAACCCACTCCACAGTGCCTCAGGAGTTTTGCAGATTGACAGTGGTAAAGGAATTCTTAGAATCTTGGACAGCAAAGGGATCGAAACTTGGTCCTCGAATGCATCGCAACAAGCAGAGAACCCAGTTTTGCAGCTTTTGGATTCAGGAAACCTAGTTCTGAGAGAGGAAAAGAACTCGAGCAGCATATTATGGCAGAGCTTTGATTATCCAGGCGATACTTTTCTCCCTGGTATGAAAATTAGAAGCGACATAGGGACAGGTAAGTATATGGGTCTGACTTCCTGGAAGTCACGGGAAGATCCTACCCCTGGTGAGTATTCTATGCACATAGATACTAAAGGCCTTCCTCAGCTAGTTGTCACAAAGGAAAAAAAAATGACATACAGAGCAGGACCGTGGACTGGGCTTGGTTTTACGGGGACCCCTGAATTGAGAACCATCAAATCCGCGAAATTTATTTTTGAGCTAAGTAAAGATGAAGCCTCCTATGAATATACTGTCCTGAATAATGCAACTCTAATGAGAAGCAGACTGATGCCAGAAGGATATCCACTGCGTTTGATATGGTCTTCTCAGGCAAATAAATGGGATGTTTTCTACCCTAGCCAGTTCGATCAGTGTGAAAGCTATGCCTTATGTGGTCCAAATACTAATTGCACCGGCGGCACTGACTCTAATTGTAAATGCTTGACCGGATACACAGCAAGCACGTCTGGTGGGTGTGTTCGAACTACTACTCGACTTGGATGTGGAAGAGGAGATGTCTTTCAAAAGTACCAAAGGATGAAATTGCCGGACACATCTGCTTCCTGGTACAACACTACCATGAGTTTGCAGGAATGTGAAAAACTATGTTTGAGAAACTGCACTTGCGCGGCATATTCTAATTTGAACATCAGTGATGGAGGAAGTGGCTGCTTGCACTGGTTTAATAACATTGTCGACTTGAGAGAACTCAAAGAGGGAGGACAAGACTTCTACATTCGAGTATTTGCAGTTTCAGGCCTAGATTCTGCAGTGAAAAATGGCATGAACAAGAGGAGGCTTGCAGGAATTGTGATAGGCTGCGCTCTATTAATCATCAGCATAGTAATACTCGGATTGATAATTAGGAAGAAGCTCATGCATCCAGGGAAAGCAATTTATTGGAGGGACAAGAATGACAAAGAAGACATTGATTTGCCAATATTTGAATTTTCAACCATTTCTAATGCCACAGATCAATTTTCAGAGAGGAATAAGTTGGGACAAGGTGGTTTTGGACCGGTGTACAAGGGCGTACTAGCAGATGGACAAGAGATTGCAGTAAAGAGGCTCTCCAAAACATCAGGACAAGGAATGGATGAGTTTAAAAATGAAGTTTTATTGATTGCAAAACTCCAACACCGCAATCTTGTAAAGCTTCTTGGTTGTTCTATTCAACAGGGAGAAAAGTTGTTGATTTATGAATTCATGCTTAATGGGAGCTTAGACTACTTTCTTTTTAATTCAACAAAAACTAAGCTACTAGATTGGGCTAAACGATTCCATATTATTGATGGGATTGCTCGAGGCCTTCTCTATCTTCATCAAGATTCAAGATTGCGAATAATCCATAGAGATCTCAAAACCAGCAACATTCTTCTTGATATTAATATGAATCCAAAAATATCAGACTTTGGATTAGCCAGAATTTTTGGAGGAGATCAAGCCGAGGCCAACACAAATAGAGTGATGGGAACATATGGTTATATGCCTCCAGAATATGCAGTGCATGGATCTTTTTCTGACAAATCTGATGTCTTTAGTTTTGGAGTAATGGTATTAGAGATAATAAGTGGGAAGAAGAATAGGGGATTTTGCGATCCACATTATCGTCTTAACCTTCTGGGACATGCATGGAAACTATGGATTGAAAAAAGACCCATGGACCTAATGGATGAACAACTGCAAGAATCAGTTATTTCATCCGAGCTGTTAAGATGTATTCAGGTGGGTCTATTATGTGTGCAACAAAGACCAGAGGATAGACCCAACATGTCCACTGTGATTTTAATGTTGAATGGTGAAAAGTCACTTCCTGATCCAGGAGAGCCAGGGTTCTACATTGGAAGTGATAATCAACCCTTAGCAAATTCTACTATAAGGAGCAGCGGGGAGTGTTCAATTAATGAAGCTTCCAACTCAACATTAGAGCCAAGATAG 2427 0.4145 MESFRKLSVCFLLLCFTSMSSTLDMITPDQPLRDGQNKSLVSDRGIFEAGFFNLANSKSRYVGIWYKDIREKTIVWVANRENPLHSASGVLQIDSGKGILRILDSKGIETWSSNASQQAENPVLQLLDSGNLVLREEKNSSSILWQSFDYPGDTFLPGMKIRSDIGTGKYMGLTSWKSREDPTPGEYSMHIDTKGLPQLVVTKEKKMTYRAGPWTGLGFTGTPELRTIKSAKFIFELSKDEASYEYTVLNNATLMRSRLMPEGYPLRLIWSSQANKWDVFYPSQFDQCESYALCGPNTNCTGGTDSNCKCLTGYTASTSGGCVRTTTRLGCGRGDVFQKYQRMKLPDTSASWYNTTMSLQECEKLCLRNCTCAAYSNLNISDGGSGCLHWFNNIVDLRELKEGGQDFYIRVFAVSGLDSAVKNGMNKRRLAGIVIGCALLIISIVILGLIIRKKLMHPGKAIYWRDKNDKEDIDLPIFEFSTISNATDQFSERNKLGQGGFGPVYKGVLADGQEIAVKRLSKTSGQGMDEFKNEVLLIAKLQHRNLVKLLGCSIQQGEKLLIYEFMLNGSLDYFLFNSTKTKLLDWAKRFHIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDINMNPKISDFGLARIFGGDQAEANTNRVMGTYGYMPPEYAVHGSFSDKSDVFSFGVMVLEIISGKKNRGFCDPHYRLNLLGHAWKLWIEKRPMDLMDEQLQESVISSELLRCIQVGLLCVQQRPEDRPNMSTVILMLNGEKSLPDPGEPGFYIGSDNQPLANSTIRSSGECSINEASNSTLEPR 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2945g00005 808 ProSiteProfiles Protein kinase domain profile. 490 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2945g00005 808 MobiDBLite consensus disorder prediction 788 808 - -
Pral2945g00005 808 SMART ntp_6 332 411 IPR003609 -
Pral2945g00005 808 SMART serkin_6 490 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2945g00005 808 ProSiteProfiles Bulb-type lectin domain profile. 23 147 IPR001480 -
Pral2945g00005 808 PIRSF SRK 2 808 IPR024171 GO:0004674
Pral2945g00005 808 CDD B_lectin 29 151 IPR001480 -
Pral2945g00005 808 CDD STKc_IRAK 496 763 - -
Pral2945g00005 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 148 - -
Pral2945g00005 808 Pfam S-locus glycoprotein domain 209 316 IPR000858 GO:0048544
Pral2945g00005 808 Pfam Protein tyrosine and serine/threonine kinase 493 758 IPR001245 GO:0004672|GO:0006468
Pral2945g00005 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 566 769 - -
Pral2945g00005 808 CDD PAN_AP_plant 327 411 - -
Pral2945g00005 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Pral2945g00005 808 SUPERFAMILY Protein kinase-like (PK-like) 475 761 IPR011009 -
Pral2945g00005 808 Pfam D-mannose binding lectin 73 177 IPR001480 -
Pral2945g00005 808 Gene3D Hepatocyte Growth Factor 328 410 - -
Pral2945g00005 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 458 565 - -
Pral2945g00005 808 ProSiteProfiles PAN/Apple domain profile. 331 412 IPR003609 -
Pral2945g00005 808 Gene3D Transferase(Phosphotransferase) domain 1 566 768 - -
Pral2945g00005 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Pral2945g00005 808 Gene3D Phosphorylase Kinase; domain 1 464 565 - -
Pral2945g00005 808 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 748 - -
Pral2945g00005 808 SMART blect_4 29 151 IPR001480 -
Pral2945g00005 808 Gene3D - 18 148 IPR036426 -
Pral2945g00005 808 Pfam PAN-like domain 331 397 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2945g00005 Pral-Chr2945 10287 14075 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2945g00005 439 779 Receptor kinase-like Gene Family AT4G23230 54.830 8.44e-127 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2945g00005 PK_Tyr_Ser-Thr 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2945g00005 - - gmx:100802416 1015.76