Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2941g00024 ATGAGCGAAATGACAGCGGACATGGAACTGCCAGGCTTCCGATTCCACCCCACCGAAGAAGAACTGCTCGACTTCTATCTCAAGAACACCATCCTTGGCAACAAGCTCCGCTTCGACATCATTGGCTTCCTCAACATTTATCACCACGATCCCTGGGACCTGCCCGGCCTGGCCAAGGTGGGAGAAAGGGAATGGTACTTCTTCGTGCCGAGGGACAAGAAGCACGGCAGCGGCGGCAGGCCCAACCGCACCACCCAGAAGGGCTTCTGGAAAGCCACCGGTTCCGACCGCAAAATCATCAGCCTGTCCGACCCCAAGCGCATCATCGGCCTGAGGAAGACCCTCGTTTTCTACCGAGGCAGAGCCCCCCGCGGCTCCAAGACCGACTGGGTCATGAATGAGTACCGCCTCCCCGACTCCTCCCACTTACCCAGGGACATTGTCCTCTGCAAGATATACAGAAAGGCCACCTCCCTGAAGGTCTTGGAGCAGAGGGCTGCGCTGGAGGAGGAGATGAAGCTACTCCCCAGCGCCTCCTCCCCCTGCACCTCCCTGGACCAACACTCACAGCCCACCCTCAAGCAAGAATCGCCTGACCATGAATTGTTTCAACCCCTACGAACCAGTGACAAGATTCCCGACCTCCAGCTCCCCCTCGTTTCCATGGACTGGAACCAAGACCCCTTCTGTGCTCAGCTTAACAGTCATTGGCTCTCCTCTCTCTCCCCCACCCTCTTAAACTTCTAA 747 0.5756 MSEMTADMELPGFRFHPTEEELLDFYLKNTILGNKLRFDIIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDKKHGSGGRPNRTTQKGFWKATGSDRKIISLSDPKRIIGLRKTLVFYRGRAPRGSKTDWVMNEYRLPDSSHLPRDIVLCKIYRKATSLKVLEQRAALEEEMKLLPSASSPCTSLDQHSQPTLKQESPDHELFQPLRTSDKIPDLQLPLVSMDWNQDPFCAQLNSHWLSSLSPTLLNF 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2941g00024 248 MobiDBLite consensus disorder prediction 178 198 - -
Pral2941g00024 248 ProSiteProfiles NAC domain profile. 9 155 IPR003441 GO:0003677|GO:0006355
Pral2941g00024 248 MobiDBLite consensus disorder prediction 178 192 - -
Pral2941g00024 248 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 187 - -
Pral2941g00024 248 Gene3D NAC domain 18 159 IPR036093 GO:0003677|GO:0006355
Pral2941g00024 248 FunFam NAC domain-containing protein 67-like 18 159 - -
Pral2941g00024 248 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Pral2941g00024 248 SUPERFAMILY NAC domain 10 155 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2941g00024 Pral-Chr2941 150514 151851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2941g00024 4 245 NAC Transcription Factor Family AT2G17040 53.986 2.74e-103 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral2941g00024 NAM 1.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2941g00024 - - jre:109012146 370.933