Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2941g00018 ATGGTCAGCGCGAAAAAGCTTGCCAATATGGCAAGAAAGTGGCAGAAGATGGCGGCTGGTAAGCGTAAGAGGATATCGTACAAAAGAGACGGCGTGGACTTGTATTCTTCAGAGGCAAACGAGGGCCATTTCGTGGTTTACAGCATAGATCATAAGCGATTTGTGCTTCCCCTCAAGTATCTCAAAAGCAGCGTCTTCAAGGAGCTGCTCAAGATGTCTGAGGAAGAGTTTGGACTGCCTTCCAACGGACCTCTTGTGCTGCCTTGTGAAAGCGTCGTCTTGGAGTATGTAATCTCGTTGGTCAAAGAAAGAGTCCCGGAACATGTAGAGAAGGTCTTAATCGCTTCAATGGCTACATGTCACGGCCTTGCGTCGTCTTCTCTTGCTCCCGCACAACCCCACCACCAACCCATAATCCGTGGCTATTAG 429 0.4918 MVSAKKLANMARKWQKMAAGKRKRISYKRDGVDLYSSEANEGHFVVYSIDHKRFVLPLKYLKSSVFKELLKMSEEEFGLPSNGPLVLPCESVVLEYVISLVKERVPEHVEKVLIASMATCHGLASSSLAPAQPHHQPIIRGY 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2941g00018 142 Pfam Auxin responsive protein 12 100 IPR003676 GO:0009733
Pral2941g00018 142 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2941g00018 Pral-Chr2941 125559 125987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2941g00018 6 137 Calmodulin-binding Proteins AT2G24400 25.316 1.23e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2941g00018 - - pcin:129286059 199.134