Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2941g00003 ATGCTTGGGCGCATATTTAATGGTTCTGGAAAACCAATTGATAATGGTCCGCCAATTTTGCCTGAGGCATACTTGGATATATCGGGAAGCTCCATCAACCCCAGCGAGAGAACCTATCCAGAGGAGATGATACAGACAGGAATATCCACAATTGATGTCATGAATTCTATTGCTAGAGGTCAAAAGATTCCTCTTTTCTCAGCTGCTGGTCTTCCCCATAATGAGATCGCTGCTCAGATATGTCGTCAGGCTGGGTTAGTCAAGAGATTGGAAAAATCTGATAATCTTCTTGAGGGTGGGGAAGAGGACAATTTTGCCATTGTGTTTGCAGCTATGGGAGTTAACATGGAGACTGCACAGTTTTTTAAGCGAGACTTTGAGGAGAATGGCTCAATGGAGAGAGTGACCCTTTTTCTTAATCTGGCAAATGATCCTACAATTGAGCGTATCATCACTCCTCGTATCGCTCTTACTACTGCTGAATACCTGGCATATGAATGTGGGAAGCATGTTCTTGTGATACTCACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCTGCTCGAGAGGAAGTACCAGGAAGGCGTGGGTATCCAGGTTACATGTATACAGATCTGGCAACAATTTATGAACGTGCTGGAAGAATCGAGGGGCGAAAAGGCTCCATTACACAGATACCAATTCTAACGATGCCAAATGATGATATTACACATCCAACTCCTGATCTTACGGGGTACATTACCGAGGGGCAGATATACATTGACAGGCAGCTGTATAACAGACAGATATACCCACCAATCAATGTCCTTCCATCGCTGTCTCGATTGATGAAGAGTGCTATTGGTGAGGGAATGACTCGAAGGGATCATTCTGATGTGTCAAACCAGCTCTATGCTAATTATGCCATCGGAAAGGATGTCCAGGCAATGAAAGCTGTGGTCGGAGAAGAAGCACTTTCATCTGAGGATCTGCTGTATCTGGAATTTTTGGACAAGTTTGAAAGGAAGTTTGTCGCCCAAGGAGCTTATGACACCCGCAATATCTTCCAGTCGCTAGATCTTGCGTGGACTTTGCTTCGGATTTTCCCCCGCGAACTTCTTCATCGTATACCAGCCAAGACCCTTGATCAATATTATAGTCGGGATGCTGCGAATTGA 1167 0.4456 MLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLYNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRDAAN 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2941g00003 388 CDD V_A-ATPase_B 1 285 - -
Pral2941g00003 388 CDD ATP-synt_V_A-type_beta_C 287 381 - -
Pral2941g00003 388 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 1 386 IPR022879 -
Pral2941g00003 388 ProSitePatterns ATP synthase alpha and beta subunits signature. 268 277 IPR020003 GO:0005524
Pral2941g00003 388 NCBIfam V-type ATPase subunit B 1 387 IPR005723 GO:0033180|GO:0046961|GO:1902600
Pral2941g00003 388 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 47 277 IPR000194 GO:0005524
Pral2941g00003 388 Gene3D - 1 388 - -
Pral2941g00003 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 283 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2941g00003 Pral-Chr2941 12050 36110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2941g00003 1 388 Primary Pumps ATPases(2) AT4G38510 98.196 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2941g00003 K02147 - sspl:121805296 768.074