Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2940g00012 ATGGAACCGGGAAATGAGGAATTGCAGCCAGCACCACCATTAGTAATGCAGGACCATCTGGATGCCATGCATACCAATGGAAGGTCTTCTGACCTTAGTACATCAGATGTTAAGCCTGTTCTTAATTACTCCATACAGACTGGTGAGGAATTCGCTCTTGAGTTTATGCGAGACAGGGTGAATCTTGGGAAGCCTGGATTTCCAAATGCTGGTGATCCCAGTTGTGCATCAGGTTATATAAAATTGAAAGACATTCTAGGTATCAGTCATGCCGGATCTGAAAGTGGGTCAGATATCTCTATGCTTTCAATTGTTGAAAAGGGTCCAAAAGAGTATGATAAAAAGAACTTGTCATTACCTGAAGACAGAAGCAATTATGGGTCAATTAGATCATTACCAAAATCTTCATTCAATCAGGACAATAGTCGATTTGTGTGTGGTTATACCTCTTTTGGAGGCTCTGATAACTCTTCAAATACAATGAAAATTCTTTGCAGCTTTGGTGGTAGAATATTGCCTCGGCCAAGTGATGGAAAGCTAAGGTATGTTGGAGGTGAAACACGCATGATCCGCTTAAGAAAAGACATATCTTGGCAGGGGCTGATGCATAAAACATTGTCAATCTATAATCAGGCTCATATACTTAAATATCAACTTCCTGGGGAAGAGCTTGATGCTTTGGTATCAGTGTCATCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCATCTGGATGATAGAGAAGGATCACAAAAGCTTAGGATGTTTTTGTTTTCGATGAATGATTTAGAGGATGCTCAGTTTGGTCTCAATGGCCTGAGTGATGATTCTGAGATCCAGTTTGTTATTGCTGTCAATGGCATGGACTTAGAATCAAGAAACAACTCAACACTTCCTGGTATGAGCTCCTCAGCAAATAATTTACATGAATTGGACAGGCACAATAATGACAGGGAGACTAGTGGAATTGCCATAGGAACTGTAGGTACCAGCAATGCTCCCCTGACCAGTAAAATTGTTTCATCATTAACTCTCCAGTCATCCCAGCCAATGCCACAAACTTTATCAAATGGTTATGAAACCCATCCACAGTTTTATGGTGATCAGATGGTACTCCATGGGGAAACCATTAGTCAGTATCCAATTCATCAAGACCTTAATCTTTCCCACAACCCTGCTTTTCGAGAGGCTCCCACTACCATTCCTCCTCATGGGATGATTAATCTACCTAGGATTTTAAATGAGGGCCGTTTACCTAGTGGATTACCAGTTCAGAATTCCAAAATACTGGCAATGCCAGTGGCCGACATAGGTGGTACTTCAGTCCAACAGGGAAGTGACCCTGAGAAAGTTTTAGCCATGCAAACACCATCTGCTGTTCCTTCTCAACCGTTTTATGGCTGCTTGAAAAATAATTTTCCTGAGTCTACCATAGCTGTTACTTTACAAGAGGGGCATATGTCTTCATCACCTTCAGCCAAAAAAGACTCACAACAGGATAGCCAAGAGTCGGCTTCTACAGCTAGCAGTGCGTTTGTTCCTGCTTATGTTGATTCCCGTTCCAAACCATATGATTTGAGTGGTATTCACCCTCCTCCACTTCCAAAGAGAGTGTACTATTCAGAAAGTACTCCCAGAGAGCGAGTTGAGACACTGAATCGTTCCTCAAAGTCAGATGATACCCAGGGGTCTCAATTTCTTGTGTCAGATTTAATTTCTGATATCAATCCACAGGGTTCAGTTGCAGAATCTGGTGACAACATGAACAATGGAAATCTAGCCAGTCGTCCTGAGGAATTGAACAGTGCAGCAAAGCCCTTGCATGCAGATCTCCACACTGTTGATAATGGATTTGCCAGACCGCCAATGCATGTGCCTAGTGCAAGCGGTCAGTCAAAATTTAAGCTATCAGAACATGTAAACCCTGAATTGAAGCAGGTATTGCCAAACAATAAGTCAAGTAAGGATGTAGTTAATGAAGATCAGTTTAATAAGTTGGAAGCTGAAAGTCATTTTAAAGATAACCATGAGGGGACTCTGCTGGATGAAAACAAAAACAGTACTCTGCAGCAGCTTCCTTCTGTTAGTCGTCACGATGATCCAGCATCTAAACTTCCGGAGATTAATTGGGGTGACGCCTCTACAAAGGAGACCAATGATGATTGTGTGACACAAGCACTACCTGTTTCTTCTACTGAGAACCCGGCTGAGGATGTTTATCAAGATTTACCCTCCAACGTTGTTTCCAAGCAAGCACAAGGTCTTCTTATTGATATTGATGATCGATTTCCCCGTGAATGGCTTTCAGATATGTACTCTAAAGCAGCACTTGCAGAAGATTCATCCTGTCTACTTCCGCTAACCAAGGATGGAATTAGTGTAAGCATAGCCATGGAAAATCATGAACCTAAAGCATGGTCATATTTTCATAAATTGGCACAAGAAGGGCTTGATAATGTGTCTCTTATTGACCGGGACCATCTTGATTTTTCACCTGCACCAGGAAATGAAGCCGGGAATAATAAAATTCACCTGATTACACCTGTAATGACTGATAGAGTTTCTTTACATCATGTGGAACCCCACCCCAACCTTGGTGAAGAAAATCAGAGAGAATTGCATAGAATGATTGGAGCTGAAACAGCTGAACTGCAGTCAAATCATGGGCACCAGTCCCAAGTTAAGGAAACTGAAAGCATGCAGTTTGATGCTATGATGGGAAACATAAGAGCTCAAGAATCTGAATTTGAGGACGTGAGTGTTGAAAAACAAAACAGTAGTCCACCACCTCTTGATGATCCTTTAGGAGATGTTGATATCAGTACCTTGCAGGTAATAAAGAATGAAGATCTTGAAGAGTTGAGGGAGCTAGGTTCTGGTACCTTTGGGACTGTTTATCATGGAAAATGGAGGGGGACAGATGTTGCCATCAAAAGAATCAAGAAAAGCTGCTTCACCGGTCGATCATCTGAACAAGAGAGACTGACTGTAGAGTTTTGGCGGGAAGCTGACATACTTTCCAAACTTCATCATCCAAATGTGGTGGCTTTTTATGGTGTGGTCCAGGATGGACCAGGTGGAACGATGGCCACTGTTACAGAATTCATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGCATCTTGATCGTAGGAAGAGGCTGATCATTGCCATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAATATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACATGAAAGATCCTCTACGGCCAATCTGCAAGGTTGGAGATTTTGGGTTGTCAAAAATCAAAAGAAATACCCTGGTCTCTGGTGGTGTGCGAGGGACCTTGCCTTGGATGGCGCCAGAGCTGTTGAATGGCAGCAGCAACAAAGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTTTTATGGGAGATTCTAACGGGTGAGGAGCCGTATGCCAATATGCACTATGGTGCAATTATAGGTGGGATAGTAAACAACACATTACGGCCAACAATCCCAAGTTATTGTGACTTGGAATGGAGAACACTAATGGAGCAATGTTGGGCACCAAATCCTGCAGCCCGGCCATCCTTCACCGAAATTGCTAGTCGCTTGCGTGTAATGTTGGCAGCAGCTAGTCAATCCAAAGCACAAGGCCACAAAGCAGCTAAATGA 3708 0.4245 MEPGNEELQPAPPLVMQDHLDAMHTNGRSSDLSTSDVKPVLNYSIQTGEEFALEFMRDRVNLGKPGFPNAGDPSCASGYIKLKDILGISHAGSESGSDISMLSIVEKGPKEYDKKNLSLPEDRSNYGSIRSLPKSSFNQDNSRFVCGYTSFGGSDNSSNTMKILCSFGGRILPRPSDGKLRYVGGETRMIRLRKDISWQGLMHKTLSIYNQAHILKYQLPGEELDALVSVSSDEDLQNMMEECNHLDDREGSQKLRMFLFSMNDLEDAQFGLNGLSDDSEIQFVIAVNGMDLESRNNSTLPGMSSSANNLHELDRHNNDRETSGIAIGTVGTSNAPLTSKIVSSLTLQSSQPMPQTLSNGYETHPQFYGDQMVLHGETISQYPIHQDLNLSHNPAFREAPTTIPPHGMINLPRILNEGRLPSGLPVQNSKILAMPVADIGGTSVQQGSDPEKVLAMQTPSAVPSQPFYGCLKNNFPESTIAVTLQEGHMSSSPSAKKDSQQDSQESASTASSAFVPAYVDSRSKPYDLSGIHPPPLPKRVYYSESTPRERVETLNRSSKSDDTQGSQFLVSDLISDINPQGSVAESGDNMNNGNLASRPEELNSAAKPLHADLHTVDNGFARPPMHVPSASGQSKFKLSEHVNPELKQVLPNNKSSKDVVNEDQFNKLEAESHFKDNHEGTLLDENKNSTLQQLPSVSRHDDPASKLPEINWGDASTKETNDDCVTQALPVSSTENPAEDVYQDLPSNVVSKQAQGLLIDIDDRFPREWLSDMYSKAALAEDSSCLLPLTKDGISVSIAMENHEPKAWSYFHKLAQEGLDNVSLIDRDHLDFSPAPGNEAGNNKIHLITPVMTDRVSLHHVEPHPNLGEENQRELHRMIGAETAELQSNHGHQSQVKETESMQFDAMMGNIRAQESEFEDVSVEKQNSSPPPLDDPLGDVDISTLQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNMKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDLEWRTLMEQCWAPNPAARPSFTEIASRLRVMLAAASQSKAQGHKAAK 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2940g00012 1235 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1041 1233 - -
Pral2940g00012 1235 Pfam Protein tyrosine and serine/threonine kinase 954 1216 IPR001245 GO:0004672|GO:0006468
Pral2940g00012 1235 MobiDBLite consensus disorder prediction 694 720 - -
Pral2940g00012 1235 SMART serkin_6 953 1220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2940g00012 1235 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 180 262 - -
Pral2940g00012 1235 ProSiteProfiles Protein kinase domain profile. 953 1220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2940g00012 1235 PRINTS Tyrosine kinase catalytic domain signature 1143 1165 IPR001245 GO:0004672|GO:0006468
Pral2940g00012 1235 PRINTS Tyrosine kinase catalytic domain signature 1035 1048 IPR001245 GO:0004672|GO:0006468
Pral2940g00012 1235 PRINTS Tyrosine kinase catalytic domain signature 1187 1209 IPR001245 GO:0004672|GO:0006468
Pral2940g00012 1235 PRINTS Tyrosine kinase catalytic domain signature 1072 1090 IPR001245 GO:0004672|GO:0006468
Pral2940g00012 1235 MobiDBLite consensus disorder prediction 543 557 - -
Pral2940g00012 1235 SUPERFAMILY CAD & PB1 domains 176 266 - -
Pral2940g00012 1235 Pfam PB1 domain 177 260 IPR000270 GO:0005515
Pral2940g00012 1235 CDD STKc_MAP3K-like 959 1216 - -
Pral2940g00012 1235 MobiDBLite consensus disorder prediction 486 512 - -
Pral2940g00012 1235 SUPERFAMILY Protein kinase-like (PK-like) 943 1215 IPR011009 -
Pral2940g00012 1235 MobiDBLite consensus disorder prediction 525 564 - -
Pral2940g00012 1235 ProSitePatterns Protein kinases ATP-binding region signature. 959 984 IPR017441 GO:0005524
Pral2940g00012 1235 Gene3D - 179 262 - -
Pral2940g00012 1235 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 946 1040 - -
Pral2940g00012 1235 Gene3D Transferase(Phosphotransferase) domain 1 1041 1235 - -
Pral2940g00012 1235 PANTHER SERINE-THREONINE PROTEIN KINASE 205 1217 - -
Pral2940g00012 1235 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1078 1090 IPR008271 GO:0004672|GO:0006468
Pral2940g00012 1235 SMART PB1_new 175 262 IPR000270 GO:0005515
Pral2940g00012 1235 MobiDBLite consensus disorder prediction 916 939 - -
Pral2940g00012 1235 CDD PB1_UP2 164 260 - -
Pral2940g00012 1235 Gene3D Phosphorylase Kinase; domain 1 946 1040 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2940g00012 Pral-Chr2940 147843 156619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2940g00012 35 618 MAP Kinase Kinase Kinase AT1G16270 38.991 2.52e-91 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pral2940g00012 PK_Tyr_Ser-Thr 1.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2940g00012 - - gmx:100799639 1590.47