Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2937g00012 ATGGCTAATAGCGCAGTTAGTTTTGTGCTGGAAAATTTGTCTCGGCTTGTGGCACATGAAGCCAATTTGCTATGTGGTGTGGAGGACAAAGTGAAGCTCCTTGAGAGTCAGCTCAGAATGATGACTGTCTTCCTGAAGAACAGCGACCACAACACACGGAAGGAGATCGAACAAGAGGTTGTGCGTCAAATCACAGACATCGCACATGAAGCTGAGGATGTCATCGACACCTATGTTGCCAATGTTGCCCGCAACCAAAGGAGAAGTTGGGTGTCCAAGATGCTCCACGGTGTAGACCATGCAAAGCTGCTGCACCATGTGGCAGAGAGAATAGACAACATTAAAGTCAGAATCGACCAGATTTGTGAAAACAGAATCAAATTCGACACCCAGGAAGCGGCAGGATCTTCAACAGATCAGGAGTTACAACTACTACACAAGCGAAGAAGGGACGTGGAAGAAGATGATGTGGTGGGTTTTCAGCATGGCACAACTGAAGTAATCAATCTCCTAGAGCAAGGGGGTCTACGTCGCAATGTGGTGTCCATCGTAGGTATGGGCGGATTGGGTAAAACTACTCTTGCTCGCAAGATTTATAACAGTGATTATGTTAAGAATCGCTTCCATTGTCATGCTTGGGTTTATGTGTCTAATGACTATAGACCTAAAGAGCTTTTGCTTGCTCTTCTTAAATGCTTGATGACAATCTCTGCAAATACTTGTTATGATAATAACAATAGCAGTCGTAAGCATAAGAAAAAATCAAAGGGCAAAGGCAAAGCTGAATCTGATGATTTTTATAGTTTGAGTGAGGAAGAATTGAGAGGCAAGGTACAACACTGTTTGAAAGAGAAGAGGTATCTTGTAGTGTTAGATGACATATGGAAACCTCAACATTGGGATGACCTACAAGATGCCTTCCCAAATGATAATAAAAGCAGTAGAATCTTGATCACCAGTCGTTTGAAAGAGGTGGCTTCTCATGCCAGCTCATCTCCTCCTTACTATCTCCCTTTTCTTAATCAGGAAGAAAGTTGGGAGCTTTTCTCAAAGAGAGTGTTTCGAGGAGAGGGCGTGCCTTCTCATCTAGAGCTACTAGGTAAACGCATGGTAAAACGTTGTGGTGGCTTGCCACTGTCCATTGTGGTACTTGCAGGGATTCTGGCAAACAAGGAGAAGTCATACGGGGAATGGTACAAGATCAAAGGCCATGTCAACTCATATCTCACTCAACCAGAAACACAAGTACAAGATATAGTGCTTAAACTTAGTTATGATAGCTTGCCTCCAAAATTGAGGCCGTGCTTTCTATATTTTGGCATGTTTCCTGAAGATCATGAGATTCCTGTTAGACACCTAATCCAGTTATGGGTTGCTGAAGGATTCATTCTTCACAGTGATTTCAGAATTACAGAGGATGTTGCAGAGGACTACTTGGATGAGCTCATTGATCGTAGCTTAATTCAAGTGGGAAGAAGAAGAAGTGATGGGGGAATCAAGACATGTCGCATCCATGATTTGCTAAGAGATCTTTGCACATCTGAGAGCGGGGAGGAGAAGGTCTTTGAAGTTTGCAGGGACGTGAACATTTTGAAGAAAACCAAACCTCGCAGGCTATCCATTCAATGTAACATGTCTGATTATTTTGCTTCAAGCAACAAAGACCATTCAGGCACACGTTCCGTGCTCTGCTTTGATCGCGACTCTGGCTACGACCTTGGTTCAAGCAAGACAAAAAGGCTTGTGAAATGTTTTCAACTTGTTCGAGTGTTGGATCTAGGAGTTCCATTGCCTTATGAGTTTAAGATCCCTCCCAATTTAAACATGTTAGTGCATTTAAGGTACTTAAGAATAGACCTGGAAGCAAGGTTTTATCAAGGATTAGTCAGAGAGATTAATGAATCCATATGCAATCTATGGAACCTGGAAACTTTGGACTTGGGGCGTTCTATATTTAGAATATCCGTTACCTTCTCCAGTGGAATGTGGAAGCTCAAGAGACTGAGACATCTTCATACAGCTGGACCTGTGATTTTACCTGAGTTTCCAAATGTAGAAAATAAGACCATGTGGAATCTACAAACCTTATCCTGTGTTGCCGTAAACGAAAAATCAGCCGCTCTGTCTCTAATAGGAAAAGGTGTTTTCCCCAAGCTTAGGAAATTGGGTTTGCGCTTTTGTGAAGATGGCAAGCATAAACAAGGAGTTGGCCAACTGTGGGAATACCTTCCAAGCCTAAATCATCTTAATGCATTGAAAATTGATGGCTTTCTTGATCTGCCAACATCTGTCAATGCCTTTCCCTCCAACCTTACCAAGCTAACAATCTATAGGGCCAACTTGAATAGCGATGTCATGAGCACGTTAGGGAGTCTTGCCAACCTTAGGATTTTGAAACTAGGTGGTTCTTGGTTTCCAGAAGCCTTAAGCTGTGAGTTAGGTCTTTGTTACATTAATAATGGATTTCCCCAATTAGAGGTATTTCAAATGAAATTGATGGGGAAGCTCTATCGCTGGGAATTAGGTAAAGATGTAATGCCACGTCTCAGACGTTTGGTCATTGAACGTTGCGTGGGGTTGACTGCTCTCCCTAACGAGCTCTGGTCCTTGACTTCCTTACGAGAGGTACAACTAGCAGGGCCCTCTAAATCGCTGAAGATGCAGCTCCAAAGTCGACCCATGAGAGATGGGTGCAATCTCACTATCTCTGAAGGTTGA 2718 0.4301 MANSAVSFVLENLSRLVAHEANLLCGVEDKVKLLESQLRMMTVFLKNSDHNTRKEIEQEVVRQITDIAHEAEDVIDTYVANVARNQRRSWVSKMLHGVDHAKLLHHVAERIDNIKVRIDQICENRIKFDTQEAAGSSTDQELQLLHKRRRDVEEDDVVGFQHGTTEVINLLEQGGLRRNVVSIVGMGGLGKTTLARKIYNSDYVKNRFHCHAWVYVSNDYRPKELLLALLKCLMTISANTCYDNNNSSRKHKKKSKGKGKAESDDFYSLSEEELRGKVQHCLKEKRYLVVLDDIWKPQHWDDLQDAFPNDNKSSRILITSRLKEVASHASSSPPYYLPFLNQEESWELFSKRVFRGEGVPSHLELLGKRMVKRCGGLPLSIVVLAGILANKEKSYGEWYKIKGHVNSYLTQPETQVQDIVLKLSYDSLPPKLRPCFLYFGMFPEDHEIPVRHLIQLWVAEGFILHSDFRITEDVAEDYLDELIDRSLIQVGRRRSDGGIKTCRIHDLLRDLCTSESGEEKVFEVCRDVNILKKTKPRRLSIQCNMSDYFASSNKDHSGTRSVLCFDRDSGYDLGSSKTKRLVKCFQLVRVLDLGVPLPYEFKIPPNLNMLVHLRYLRIDLEARFYQGLVREINESICNLWNLETLDLGRSIFRISVTFSSGMWKLKRLRHLHTAGPVILPEFPNVENKTMWNLQTLSCVAVNEKSAALSLIGKGVFPKLRKLGLRFCEDGKHKQGVGQLWEYLPSLNHLNALKIDGFLDLPTSVNAFPSNLTKLTIYRANLNSDVMSTLGSLANLRILKLGGSWFPEALSCELGLCYINNGFPQLEVFQMKLMGKLYRWELGKDVMPRLRRLVIERCVGLTALPNELWSLTSLREVQLAGPSKSLKMQLQSRPMRDGCNLTISEG 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2937g00012 905 CDD RX-CC_like 2 121 IPR038005 -
Pral2937g00012 905 Gene3D - 425 516 IPR036388 -
Pral2937g00012 905 PRINTS Disease resistance protein signature 180 195 - -
Pral2937g00012 905 PRINTS Disease resistance protein signature 374 388 - -
Pral2937g00012 905 PRINTS Disease resistance protein signature 637 653 - -
Pral2937g00012 905 Pfam Rx N-terminal domain 5 89 IPR041118 -
Pral2937g00012 905 FunFam Probable disease resistance protein At1g61300 140 333 - -
Pral2937g00012 905 Gene3D - 4 117 - -
Pral2937g00012 905 Gene3D Ribonuclease Inhibitor 568 901 IPR032675 -
Pral2937g00012 905 PANTHER DISEASE RESISTANCE PROTEIN RP 34 857 IPR044974 GO:0006952
Pral2937g00012 905 FunFam Probable disease resistance protein At1g63360 425 514 - -
Pral2937g00012 905 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 439 IPR027417 -
Pral2937g00012 905 Gene3D - 136 333 IPR027417 -
Pral2937g00012 905 Pfam NB-ARC domain 167 425 IPR002182 GO:0043531
Pral2937g00012 905 SUPERFAMILY L domain-like 503 880 - -
Pral2937g00012 905 Gene3D - 339 424 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2937g00012 Pral-Chr2937 124222 126939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2937g00012 158 511 WRKY Transcription Factor Family AT5G45050 24.370 1.23e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2937g00012 - - pcin:129285390 1242.25